RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 EFNB1P98172 346 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 ZNF92Q03936 586 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 MPPED2Q15777 294 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 KCNJ8Q15842 424 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 AADACL4Q5VUY2 407 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 DRAM2Q6UX65 266 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 C9orf139Q6ZV77 190 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 C19orf18Q8NEA5 215 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 OR2AE1Q8NHA4 323 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 THEM6Q8WUY1 208 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 DACT3Q96B18 629 aaPredicted RBP15.62■□□□□ 0.09
PNKP-213ENST00000599543 TEAD3Q99594 435 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 ABHD6Q9BV23 337 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 MARCH7Q9H992 704 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 NKX1-2Q9UD57 310 aaPredicted RBP15.62■□□□□ 0.09
PNKP-213ENST00000599543 TRRAPQ9Y4A5 3859 aa15.62■□□□□ 0.09
PNKP-213ENST00000599543 KIR2DS1A0A191URI9 304 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 CLDN34H7C241 214 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 PSMD9O00233 223 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 GMDSO60547 372 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 PLATP00750 562 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 SLC2A1P11166 492 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 OTX1P32242 354 aaPredicted RBP15.61■□□□□ 0.09
PNKP-213ENST00000599543 BLVRAP53004 296 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 TAF13Q15543 124 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 PCK2Q16822 640 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 TEX30Q5JUR7 227 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 SLC35D3Q5M8T2 416 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 GLYATL3Q5SZD4 288 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 WDR25Q64LD2 544 aaPredicted RBP15.61■□□□□ 0.09
PNKP-213ENST00000599543 LYPD2Q6UXB3 125 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 MEPCEQ7L2J0 689 aaKnown RBP15.61■□□□□ 0.09
PNKP-213ENST00000599543 ZNF747Q9BV97 191 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 MRPL15Q9P015 296 aaKnown RBP15.61■□□□□ 0.09
PNKP-213ENST00000599543 RNF7Q9UBF6 113 aa15.61■□□□□ 0.09
PNKP-213ENST00000599543 ENSAO43768 121 aaKnown RBP15.6■□□□□ 0.09
PNKP-213ENST00000599543 SLC9A3R2Q15599 337 aa15.6■□□□□ 0.09
PNKP-213ENST00000599543 SHISA2Q6UWI4 295 aa15.6■□□□□ 0.09
PNKP-213ENST00000599543 SHFQ7M4L6 423 aa15.6■□□□□ 0.09
PNKP-213ENST00000599543 BOLLQ8N9W6 283 aaKnown RBP15.6■□□□□ 0.09
PNKP-213ENST00000599543 TECTBQ96PL2 329 aa15.6■□□□□ 0.09
PNKP-213ENST00000599543 OPA3Q9H6K4 179 aa15.6■□□□□ 0.09
PNKP-213ENST00000599543 IMPAD1Q9NX62 359 aa15.6■□□□□ 0.09
PNKP-213ENST00000599543 H2AFY2Q9P0M6 372 aaPredicted RBP15.6■□□□□ 0.09
PNKP-213ENST00000599543 DLGAP1O14490 977 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 PSMB10P40306 273 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 NPY4RP50391 375 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 CDC42P60953 191 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 FGF12P61328 243 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 OR8B8Q15620 311 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 LCN1P1Q5VSP4 162 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 NXNL2Q5VZ03 156 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 SFRP4Q6FHJ7 346 aaPredicted RBP15.59■□□□□ 0.09
PNKP-213ENST00000599543 PLPP7Q8NBV4 271 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 HRASLS5Q96KN8 279 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 KCNJ15Q99712 375 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 BRD7Q9NPI1 651 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 TRIM36Q9NQ86 728 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 COPS3Q9UNS2 423 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 GMPPBQ9Y5P6 360 aa15.59■□□□□ 0.09
PNKP-213ENST00000599543 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.58■□□□□ 0.08
PNKP-213ENST00000599543 PRR32B1ATL7 298 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 ZNF878C9JN71 531 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 E9PQ18 207 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 C3orf80F5H4A9 247 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 TMPRSS2O15393 492 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 MAGEB4O15481 346 aaPredicted RBP15.58■□□□□ 0.08
PNKP-213ENST00000599543 PTBP3O95758 552 aaKnown RBP15.58■□□□□ 0.08
PNKP-213ENST00000599543 IL13RA1P78552 427 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 HOXA4Q00056 320 aaPredicted RBP15.58■□□□□ 0.08
PNKP-213ENST00000599543 MZT1Q08AG7 82 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 GPR157Q5UAW9 335 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 CD276Q5ZPR3 534 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 BRD3OSQ6XYD6 125 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 ZNF841Q6ZN19 808 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 SLC16A9Q7RTY1 509 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 SPERTQ8NA61 448 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 OR56B2PQ8NGI1 322 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 OR51G2Q8NGK0 314 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 OTOSQ8NHW6 89 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 TBX5Q99593 518 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 FAM118AQ9NWS6 357 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 ERVK-18Q9QC07 812 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 SOX21Q9Y651 276 aaPredicted RBP15.58■□□□□ 0.08
PNKP-213ENST00000599543 MEGF8Q7Z7M0 2845 aa15.58■□□□□ 0.08
PNKP-213ENST00000599543 MDFIC2A0A1B0GVS7 189 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 A6NLC8 198 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 C22orf46C9J442 243 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 LGALS8O00214 317 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 XRCC2O43543 280 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 ENTPD6O75354 484 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 CLIC3O95833 236 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 LYNP07948 512 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 H2BFMP0C1H6 154 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 SLC15A1P46059 708 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 CX3CR1P49238 355 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 GID4Q8IVV7 300 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 OR8J1Q8NGP2 316 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 RNF133Q8WVZ7 376 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 CNN2Q99439 309 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms