RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 OR4C15Q8NGM1 316 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 PIFOQ8TCI5 191 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 SEH1LQ96EE3 360 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 FAM46AQ96IP4 442 aaKnown RBP8.2□□□□□ -1.1
TRIM28-210ENST00000597618 GPR61Q9BZJ8 451 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 PRSS22Q9GZN4 317 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 ANKRD19PQ9H560 264 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 HAO2Q9NYQ3 351 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 KCNG2Q9UJ96 466 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 ZNF391Q9UJN7 358 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 SNX13Q9Y5W8 968 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 SIGLEC5O15389 551 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 XRCC2O43543 280 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 GLCEO94923 617 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 CLIC3O95833 236 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 RENP00797 406 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 HLA-DQA2P01906 255 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 NHLRC4P0CG21 123 aaPredicted RBP8.19□□□□□ -1.1
TRIM28-210ENST00000597618 TROVE2P10155 538 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRIM28-210ENST00000597618 PAX6P26367 422 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 OTX1P32242 354 aaPredicted RBP8.19□□□□□ -1.1
TRIM28-210ENST00000597618 VDAC2P45880 294 aaPredicted RBP8.19□□□□□ -1.1
TRIM28-210ENST00000597618 LGALS4P56470 323 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 DGUOKQ16854 277 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 ZNF788Q6ZQV5 615 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 STON2Q8WXE9 905 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 RSRC1Q96IZ7 334 aaKnown RBP8.19□□□□□ -1.1
TRIM28-210ENST00000597618 MAP6Q96JE9 813 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 GAFA1Q96PS6 74 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 RAB3IPQ96QF0 476 aaPredicted RBP8.19□□□□□ -1.1
TRIM28-210ENST00000597618 OR5M11Q96RB7 305 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 TLNRD1Q9H1K6 362 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 HEXA-AS1Q9H8Q6 139 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 SRA1Q9HD15 236 aaKnown RBP8.19□□□□□ -1.1
TRIM28-210ENST00000597618 SNTG1Q9NSN8 517 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 PITPNC1Q9UKF7 332 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 TCF19Q9Y242 345 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 U3KQK5 164 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 DNAH1Q9P2D7 4330 aa8.19□□□□□ -1.1
TRIM28-210ENST00000597618 TENM2Q9NT68 2774 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 FAM220BPB1ANY3 271 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 FXYD1O00168 92 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 CDIPTO14735 213 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 ANOS1P23352 680 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
TRIM28-210ENST00000597618 GNALP38405 381 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 SLC7A2P52569 658 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 FXYD6P3P58550 94 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 GMFBP60983 142 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 CD83Q01151 205 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 SPIBQ01892 262 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 SMARCD3Q6STE5 483 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 VTCN1Q7Z7D3 282 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 CPLX4Q7Z7G2 160 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 ZBTB46Q86UZ6 589 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 CYP4Z1Q86W10 505 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 FAM185AQ8N0U4 392 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 CYB561A3Q8NBI2 242 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 OR2T12Q8NG77 320 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 OR10Z1Q8NGY1 313 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 ANGPTL6Q8NI99 470 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 SPSB4Q96A44 273 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 ERMAPQ96PL5 475 aaPredicted RBP8.18□□□□□ -1.1
TRIM28-210ENST00000597618 NMNAT3Q96T66 252 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 COPS4Q9BT78 406 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 TMEM120AQ9BXJ8 343 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 KRCC1Q9NPI7 259 aaPredicted RBP8.18□□□□□ -1.1
TRIM28-210ENST00000597618 RPRD1BQ9NQG5 326 aaKnown RBP8.18□□□□□ -1.1
TRIM28-210ENST00000597618 ABCB10Q9NRK6 738 aa8.18□□□□□ -1.1
TRIM28-210ENST00000597618 A0A1W2PPH5 198 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 A6NDX4 124 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 UNC119BA6NIH7 251 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 F2RL2O00254 374 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 NPPAP01160 153 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 ACAA1P09110 424 aaPredicted RBP8.17□□□□□ -1.1
TRIM28-210ENST00000597618 ZNF823P16415 610 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 OMPP47874 163 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 MXRA7P84157 204 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 IL5RAQ01344 420 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 IFI44LQ53G44 452 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 COQ5Q5HYK3 327 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 RNF144BQ7Z419 303 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 TMEM219Q86XT9 240 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 MKXQ8IYA7 352 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 FTMTQ8N4E7 242 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 OR5AU1Q8NGC0 362 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 OR5K1Q8NHB7 308 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 FANK1Q8TC84 345 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 RPS4Y2Q8TD47 263 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 TLCD1Q96CP7 247 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 FOXRED1Q96CU9 486 aaPredicted RBP8.17□□□□□ -1.1
TRIM28-210ENST00000597618 MICU1Q9BPX6 476 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 PARD6BQ9BYG5 372 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 NSRP1Q9H0G5 558 aaKnown RBP8.17□□□□□ -1.1
TRIM28-210ENST00000597618 WDR13Q9H1Z4 485 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 MUC13Q9H3R2 512 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 ELL3Q9HB65 397 aaPredicted RBP8.17□□□□□ -1.1
TRIM28-210ENST00000597618 INPP5EQ9NRR6 644 aa8.17□□□□□ -1.1
TRIM28-210ENST00000597618 MRPL22Q9NWU5 206 aaKnown RBP8.17□□□□□ -1.1
TRIM28-210ENST00000597618 LRP12Q9Y561 859 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms