RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 IRF2P14316 349 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 ACKR3P25106 362 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 PMELP40967 661 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 CD200P41217 278 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 GZMKP49863 264 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 MMP16P51512 607 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 OR12D2P58182 307 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 KRTAP1-1Q07627 177 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 PRDX4Q13162 271 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 MPPED2Q15777 294 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 DMRTC1Q5HYR2 192 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 MOB3CQ70IA8 216 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 CATSPERDQ86XM0 798 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 ELMOD2Q8IZ81 293 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 C8orf59Q8N0T1 100 aaPredicted RBP9.35□□□□□ -0.91
LIG1-211ENST00000596457 ACBD7Q8N6N7 88 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 C19orf18Q8NEA5 215 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 OR52I1Q8NGK6 324 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 OR11L1Q8NGX0 322 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 RORBQ92753 470 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 MRPL48Q96GC5 212 aaKnown RBP9.35□□□□□ -0.91
LIG1-211ENST00000596457 HIST1H2AAQ96QV6 131 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 GAL3ST1Q99999 423 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 ALG8Q9BVK2 526 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 LPAR2Q9HBW0 351 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 ACOXLQ9NUZ1 547 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 C14orf119Q9NWQ9 140 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 C1orf123Q9NWV4 160 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 PCDHB10Q9UN67 800 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 PIGLQ9Y2B2 252 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 A0A0U1RQV5 110 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 LRRC30A6NM36 301 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 ANXA2P2A6NMY6 339 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 INAFM1C9JVW0 142 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 H0YAE9 185 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 TMEM178BH3BS89 294 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 FAM20BO75063 409 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 MTRF1O75570 445 aaKnown RBP9.34□□□□□ -0.91
LIG1-211ENST00000596457 SULT1C4O75897 302 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 HTR1AP08908 422 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 GNAO1P09471 354 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 FAHP16930 419 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 AQP4P55087 323 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 ISL1P61371 349 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 MZT1Q08AG7 82 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 RIPPLY1Q0D2K3 151 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 RAB40BQ12829 278 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 OR8B8Q15620 311 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 SNCBQ16143 134 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 CDONQ4KMG0 1287 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 CEP78Q5JTW2 689 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 FAM201AQ5SY85 155 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 C6orf52Q5T4I8 152 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 ZNF684Q5T5D7 378 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 ZNF826PQ6ZT77 177 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 FTMTQ8N4E7 242 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 SPERTQ8NA61 448 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 SEMA6DQ8NFY4 1073 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 MSI2Q96DH6 328 aaKnown RBP9.34□□□□□ -0.91
LIG1-211ENST00000596457 RNF170Q96K19 258 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 C4orf36Q96KX1 117 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 MICU1Q9BPX6 476 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 ZNF665Q9H7R5 613 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 MOB1AQ9H8S9 216 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 FN3KRPQ9HA64 309 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 ZNF391Q9UJN7 358 aa9.34□□□□□ -0.91
LIG1-211ENST00000596457 VPS13CQ709C8 3753 aa9.34□□□□□ -0.92
LIG1-211ENST00000596457 ZNF816-ZNF321PA0A0X1KG74 233 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 A0A1B0GVI7 797 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 A0A1B0GWJ7 208 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 FAM157AC9JC47 383 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 J3QRE1 110 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 ATP6V1G2O95670 118 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 IGHV2-70P01814 119 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 CDH15P55291 814 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 GMFBP60983 142 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 BTG1P62324 171 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 ACTA2P62736 377 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 ACTG2P63267 376 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 HOXA4Q00056 320 aaPredicted RBP9.33□□□□□ -0.92
LIG1-211ENST00000596457 IL18R1Q13478 541 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 GALEQ14376 348 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 WDR38Q5JTN6 314 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 PLCXD3Q63HM9 321 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 SFRP4Q6FHJ7 346 aaPredicted RBP9.33□□□□□ -0.92
LIG1-211ENST00000596457 FAM166AQ6J272 317 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 KCTD20Q7Z5Y7 419 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 KLBQ86Z14 1044 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 ZDHHC23Q8IYP9 409 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 RDH10Q8IZV5 341 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 C1orf87Q8N0U7 546 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 PRSS35Q8N3Z0 413 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 CELF2-AS1Q8N7Q2 184 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 LINC01356Q8N9X3 169 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 DEFB108BQ8NET1 73 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 BPIFB6Q8NFQ5 453 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 HPS1Q92902 700 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 RTL8AQ9BWD3 113 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 VCX3BQ9H321 246 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms