RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 WFIKKN1Q96NZ8 548 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 ZCCHC4Q9H5U6 513 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 OPA3Q9H6K4 179 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 NGBQ9NPG2 151 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 TUBG2Q9NRH3 451 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 V9GY05 133 aa11.26□□□□□ -0.61
SHKBP1-209ENST00000595803 TRAV8-7A0A075B6U6 113 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 ANXA2P2A6NMY6 339 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 DHRS7CA6NNS2 312 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 SMPD2O60906 423 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 NCR1O76036 304 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 OCMP0CE72 109 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 IGFBP3P17936 291 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 FSTP19883 344 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 RAB3AP20336 220 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 AGAP20933 346 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 CCKARP32238 428 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 GK2Q14410 553 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF404Q494X3 552 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 IDNKQ5T6J7 187 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 LRRTM1Q86UE6 522 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF101Q8IZC7 436 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 OR1M1Q8NGA1 313 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 AP3S1Q92572 193 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 MMP27Q9H306 513 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 NEK6Q9HC98 313 aa11.25□□□□□ -0.61
SHKBP1-209ENST00000595803 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 hCG_38984A0A1B0GV85 526 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 NOTOA8MTQ0 251 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 MAGEB3O15480 346 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 ICMTO60725 284 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 CLDN14O95500 239 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 ERCC1P07992 297 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 FAHP16930 419 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 PTAFRP25105 342 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 BDKRB2P30411 391 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 SSTR2P30874 369 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 CALCRP30988 508 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 OR10A3P58181 314 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 SPOCK1Q08629 439 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 HLXQ14774 488 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 CEP78Q5JTW2 689 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 GLT8D1Q68CQ7 371 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 MZT2AQ6P582 158 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 TMEM108Q6UXF1 575 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 C22orf34Q6ZV56 151 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 RFPL4BQ6ZWI9 263 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF808Q8N4W9 903 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 CSNK2A3Q8NEV1 391 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 SLC25A40Q8TBP6 338 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 PP6455Q8WZ26 134 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 FOXRED1Q96CU9 486 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 CMBLQ96DG6 245 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 RADILQ96JH8 1075 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 TSC22D3Q99576 134 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 BARHL1Q9BZE3 327 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 BCL2L14Q9BZR8 327 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 SLIRPQ9GZT3 109 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 POFUT1Q9H488 388 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 TMEM138Q9NPI0 162 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 NPAP1Q9NZP6 1156 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 RTTNQ86VV8 2226 aa11.24□□□□□ -0.61
SHKBP1-209ENST00000595803 A0A075B6Q4 140 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF816-ZNF321PA0A0X1KG74 233 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 CLPXO76031 633 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 THBDP07204 575 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 EPXP11678 715 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 CD99P14209 185 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 SELEP16581 610 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 ATF1P18846 271 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 CD40P25942 277 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 SORDQ00796 357 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 CDSNQ15517 529 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 OR8B8Q15620 311 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF718Q3SXZ3 478 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 CLVS2Q5SYC1 327 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 SPATA46Q5T0L3 261 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 ZBTB37Q5TC79 503 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 SFXN4Q6P4A7 337 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 FBXW12Q6X9E4 464 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 MOB3CQ70IA8 216 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 UTS2BQ765I0 119 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 OR13C9Q8NGT0 318 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 LINC01560Q8TB33 94 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 ITLN2Q8WWU7 325 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 ACOT12Q8WYK0 555 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 PIGCQ92535 297 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 DACH2Q96NX9 599 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 TMUB1Q9BVT8 246 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 C6orf62Q9GZU0 229 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 KCNN3Q9UGI6 736 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 DAPK2Q9UIK4 370 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 A3GALT2U3KPV4 340 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 PMF1-BGLAPU3KQ54 211 aa11.23□□□□□ -0.61
SHKBP1-209ENST00000595803 A0A0G2JK05 382 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 DPRXA6NFQ7 191 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 ANKRD30BLA7E2S9 258 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 CD300LBA8K4G0 201 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 SULT1B1O43704 296 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms