RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CSNK2BP67870 215 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF85Q03923 595 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 EGR3Q06889 387 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 POU4F2Q12837 409 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF154Q13106 437 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 PRDX4Q13162 271 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 TMED1Q13445 227 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 OCLNQ16625 522 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF829Q3KNS6 432 aaPredicted RBP9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 LYPD2Q6UXB3 125 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 ZBTB49Q6ZSB9 765 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 C1orf87Q8N0U7 546 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 MUC20Q8N307 709 aaPredicted RBP9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 KLHL36Q8N4N3 616 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 GCSAMQ8N6F7 178 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 CSNK2A3Q8NEV1 391 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 OR51E1Q8TCB6 317 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 HPSE2Q8WWQ2 592 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 RNF166Q96A37 237 aaPredicted RBP9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 METTL17Q9H7H0 456 aaPredicted RBP9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 FN3KRPQ9HA64 309 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 GPR84Q9NQS5 396 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 MMP26Q9NRE1 261 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 C1orf123Q9NWV4 160 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 IMPAD1Q9NX62 359 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 RNF7Q9UBF6 113 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF391Q9UJN7 358 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 PCDHB10Q9UN67 800 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 POLR3KQ9Y2Y1 108 aaPredicted RBP9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 PPIAL4AQ9Y536 164 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 A0A1B0GTI1 187 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF850A8MQ14 1090 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 C3orf80F5H4A9 247 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 TRAPPC2LH3BP13 241 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 TNFRSF13BO14836 293 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 PHF1O43189 567 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 BAG2O95816 211 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 LHBP01229 141 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 OR2T7P0C7T2 308 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 EGR1P18146 543 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 CD80P33681 288 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 ISL1P61371 349 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 PAX2Q02962 417 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 FAHD2BQ6P2I3 314 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 ENTHD1Q8IYW4 607 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 ELMOD2Q8IZ81 293 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 OR1M1Q8NGA1 313 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 OR10H4Q8NGA5 316 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 OR11L1Q8NGX0 322 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 OR2T27Q8NH04 317 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 OR8S1Q8NH09 359 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 OR5P3Q8WZ94 311 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 STMN2Q93045 179 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 RFKQ969G6 155 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 FAHD2AQ96GK7 314 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 MDFIQ99750 246 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 TLNRD1Q9H1K6 362 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 C14orf119Q9NWQ9 140 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 FAM118AQ9NWS6 357 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 OPN4Q9UHM6 478 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 GMPPBQ9Y5P6 360 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 MPC1Q9Y5U8 109 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 R4GMQ9 66 aa9.18□□□□□ -0.94
SHKBP1-206ENST00000595523 LOC105371242A0A075B767 164 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 PPIAL4CA0A0B4J2A2 164 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 A0A0G2JMP0 313 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 A0A0X1KG70 313 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 A6NLC8 198 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 LOC110117498-PIK3R3F6TDL0 507 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 FOXH1O75593 365 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 FCN3O75636 299 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 IRF2P14316 349 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 RPS2P15880 293 aaKnown RBP9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 FAHP16930 419 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 PCMT1P22061 227 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 GNALP38405 381 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 PSMB10P40306 273 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 MTNR1AP48039 350 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 ZSCAN26Q16670 478 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 FAM76BQ5HYJ3 339 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 DMRTC1Q5HYR2 192 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 DCAF12L2Q5VW00 463 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 SFRP4Q6FHJ7 346 aaPredicted RBP9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 WDR82Q6UXN9 313 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF841Q6ZN19 808 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 DCDC5Q6ZRR9 648 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 Q6ZSR3 168 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 FAM90A1Q86YD7 464 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 GALNT4Q8N4A0 578 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 FTMTQ8N4E7 242 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 YIPF7Q8N8F6 280 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 BOLLQ8N9W6 283 aaKnown RBP9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 DEFB108BQ8NET1 73 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 OR4M2Q8NGB6 313 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 RHOXF1Q8NHV9 184 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 APH1BQ8WW43 257 aa9.17□□□□□ -0.94
SHKBP1-206ENST00000595523 PIGCQ92535 297 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms