RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TIAF1O95411 115 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 CHRM2P08172 466 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 HCKP08631 526 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 PGA4P0DJD7 388 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 PGA3P0DJD8 388 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 PI3P19957 117 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 KCNJ3P48549 501 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 CX3CR1P49238 355 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 TMEM50BP56557 158 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 PJVKQ0ZLH3 352 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 PLPPR5Q32ZL2 321 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 TMPRSS9Q7Z410 1059 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 CADM4Q8NFZ8 388 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 NUBPLQ8TB37 319 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 RXFP4Q8TDU9 374 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 C1orf147Q96MC9 270 aaPredicted RBP14.57□□□□□ -0.08
LIG1-206ENST00000594067 MSGN1A6NI15 193 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 CDC14BO60729 498 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 IGHG1P01857 330 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 HEXAP06865 529 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 TBPP20226 339 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 NFYBP25208 207 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 GSK3AP49840 483 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 MEOX2P50222 304 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 SLC9A3R2Q15599 337 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 SGCAQ16586 387 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 RHBDD2Q6NTF9 364 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 OR10G3Q8NGC4 313 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 TERB2Q8NHR7 220 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 C2CD4CQ8TF44 421 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 OR5B2Q96R09 309 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 GPER1Q99527 375 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 TGIF2Q9GZN2 237 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 FBLN5Q9UBX5 448 aa14.57□□□□□ -0.08
LIG1-206ENST00000594067 RAMP1O60894 148 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 SRFP11831 508 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 HIST1H1DP16402 221 aaKnown RBP14.56□□□□□ -0.08
LIG1-206ENST00000594067 KLK2P20151 261 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 GABREP78334 506 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 CYCSP99999 105 aaKnown RBP14.56□□□□□ -0.08
LIG1-206ENST00000594067 PDZK1IP1Q13113 114 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 SMAD4Q13485 552 aaKnown RBP14.56□□□□□ -0.08
LIG1-206ENST00000594067 DRAM2Q6UX65 266 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 IL34Q6ZMJ4 242 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 BHLHE23Q8NDY6 225 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 TMEM59Q9BXS4 323 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 C5orf66Q9H5L9 145 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 METTL7AQ9H8H3 244 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 FANCFQ9NPI8 374 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 ADAP1O75689 374 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 CRTAPO75718 401 aaPredicted RBP14.56□□□□□ -0.08
LIG1-206ENST00000594067 ZNF17P17021 662 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 PTGDSP41222 190 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 NKAIN1Q4KMZ8 207 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 AVPI1Q5T686 147 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 FAM57BQ71RH2 274 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 TMEM230Q96A57 120 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 ARHGAP5-AS1Q96IT6 56 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 MRGPRX4Q96LA9 322 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 FAM96BQ9Y3D0 163 aa14.56□□□□□ -0.08
LIG1-206ENST00000594067 ZNF705EA8MWA4 302 aaPredicted RBP14.55□□□□□ -0.08
LIG1-206ENST00000594067 TRAF3IP2O43734 574 aaPredicted RBP14.55□□□□□ -0.08
LIG1-206ENST00000594067 APOC1P02654 83 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 SFTPDP35247 375 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 P2RY4P51582 365 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 TAS2R31P59538 309 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 S100A12P80511 92 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 TMEM128Q5BJH2 165 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 KMT5CQ86Y97 462 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 FAM219AQ8IW50 185 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 KCNG3Q8TAE7 436 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 WDR77Q9BQA1 342 aaPredicted RBP14.55□□□□□ -0.08
LIG1-206ENST00000594067 NRIP2Q9BQI9 281 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 NUDT16L1Q9BRJ7 211 aaKnown RBP14.55□□□□□ -0.08
LIG1-206ENST00000594067 MOB1AQ9H8S9 216 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 RCC2Q9P258 522 aaKnown RBP14.55□□□□□ -0.08
LIG1-206ENST00000594067 LPAR3Q9UBY5 353 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 GPR132Q9UNW8 380 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 SRPK3Q9UPE1 567 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 GSTP1P09211 210 aaKnown RBP14.55□□□□□ -0.08
LIG1-206ENST00000594067 SLC6A9P48067 706 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 NAA40Q86UY6 237 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 ZFP82Q8N141 532 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 ZNF283Q8N7M2 679 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 OR5D18Q8NGL1 313 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 SFT2D1Q8WV19 159 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 ZNF775Q96BV0 537 aaPredicted RBP14.55□□□□□ -0.08
LIG1-206ENST00000594067 CABIN1Q9Y6J0 2220 aa14.55□□□□□ -0.08
LIG1-206ENST00000594067 C5orf63A6NC05 138 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 LINC01387J3KSC0 135 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 ETV2O00321 342 aaPredicted RBP14.54□□□□□ -0.08
LIG1-206ENST00000594067 OR2J2O76002 312 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 QDPRP09417 244 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 MUC1P15941 1255 aaPredicted RBP14.54□□□□□ -0.08
LIG1-206ENST00000594067 ARFRP1Q13795 201 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 SLC25A47Q6Q0C1 308 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 CLEC18BQ6UXF7 455 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 CDC6Q99741 560 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 HRH4Q9H3N8 390 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 RHOFQ9HBH0 211 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms