RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 CFHR4Q92496 578 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 GTF3AQ92664 365 aaKnown RBP5.48□□□□□ -1.53
VPS4B-205ENST00000591383 MRPL24Q96A35 216 aaKnown RBP5.48□□□□□ -1.53
VPS4B-205ENST00000591383 SPSB4Q96A44 273 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 C4orf36Q96KX1 117 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 OR8B4Q96RC9 309 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 DCLRE1CQ96SD1 692 aaKnown RBP5.48□□□□□ -1.53
VPS4B-205ENST00000591383 MNTQ99583 582 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 TRAF4Q9BUZ4 470 aaPredicted RBP5.48□□□□□ -1.53
VPS4B-205ENST00000591383 ALG8Q9BVK2 526 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 MROQ9BYG7 248 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 MS4A7Q9GZW8 240 aaPredicted RBP5.48□□□□□ -1.53
VPS4B-205ENST00000591383 CXorf56Q9H5V9 222 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 MOB1AQ9H8S9 216 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 GCM1Q9NP62 436 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 HAO2Q9NYQ3 351 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 MYEF2Q9P2K5 600 aaKnown RBP5.48□□□□□ -1.53
VPS4B-205ENST00000591383 ST6GALNAC2Q9UJ37 374 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 RAB26Q9ULW5 256 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 STARD10Q9Y365 291 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 PCDHGB1Q9Y5G3 927 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 HSPE1-MOB4S4R3N1 261 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 PDZD2O15018 2839 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 USF3Q68DE3 2245 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 ITPR3Q14573 2671 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 ARFGEF3Q5TH69 2177 aa5.48□□□□□ -1.53
VPS4B-205ENST00000591383 OTOGQ6ZRI0 2925 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 CELSR1Q9NYQ6 3014 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 TMEM269A0A1B0GVZ9 245 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 C5orf63A6NC05 138 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 METTL15A6NJ78 407 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 B9A039 149 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 H3BSA7 217 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 H3BSH0 61 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 J3QLW9 94 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 MYL12BO14950 172 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 DANCRP0C864 163 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 ZNF19P17023 458 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 EEF1B2P24534 225 aaKnown RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 APOBEC3AP31941 199 aaPredicted RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 OTX1P32242 354 aaPredicted RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 GP2P55259 537 aaKnown RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 ZNF85Q03923 595 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 MED21Q13503 144 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 CARTPTQ16568 116 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 ODF4Q2M2E3 257 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 KRTAP27-1Q3LI81 207 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 KLHL22Q53GT1 634 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 PGAP1Q75T13 922 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 LHFPL3Q86UP9 236 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 DTX2Q86UW9 622 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 NAA40Q86UY6 237 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 STX19Q8N4C7 294 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 ZNF540Q8NDQ6 660 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 KLF14Q8TD94 323 aaPredicted RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 SPRYD4Q8WW59 207 aaPredicted RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 MARS2Q96GW9 593 aaKnown RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 REEP6Q96HR9 211 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 FAM71F1Q96KD3 344 aaPredicted RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 COG8Q96MW5 612 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 ADAT1Q9BUB4 502 aaKnown RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 C1QTNF5Q9BXJ0 243 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 TINAGL1Q9GZM7 467 aaPredicted RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 NIPAL2Q9H841 368 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 SP140LQ9H930 580 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 INPP5EQ9NRR6 644 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 CBLN4Q9NTU7 201 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 TBCCD1Q9NVR7 557 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 FAM206AQ9NX38 181 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 CHCHD3Q9NX63 227 aaKnown RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 SCN3BQ9NY72 215 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 TAAR3PQ9P1P4 343 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 MRM2Q9UI43 246 aaKnown RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 BLOC1S6Q9UL45 172 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 DIMT1Q9UNQ2 313 aaKnown RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 MYRFQ9Y2G1 1151 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 R4GMQ9 66 aa5.47□□□□□ -1.53
VPS4B-205ENST00000591383 FLNAP21333 2647 aaKnown RBP5.47□□□□□ -1.53
VPS4B-205ENST00000591383 LOC107986453A0A1B0GWG9 222 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 GGT3PA6NGU5 568 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ZSCAN5BA6NJL1 495 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 M0QYG6 137 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 XRCC2O43543 280 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ZNF254O75437 659 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ERCC1P07992 297 aaPredicted RBP5.46□□□□□ -1.54
VPS4B-205ENST00000591383 HTR1AP08908 422 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ADRA2AP08913 450 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 PIPP12273 146 aaPredicted RBP5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ZNF250P15622 560 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 PTH2RP49190 550 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 PPOXP50336 477 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ETV1P50549 477 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 PTTG1IPP53801 180 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ATP5J2P56134 94 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 OR12D2P58182 307 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 RAP2BP61225 183 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ZNF92Q03936 586 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 ST3GAL4Q11206 333 aa5.46□□□□□ -1.54
VPS4B-205ENST00000591383 GK2Q14410 553 aaPredicted RBP5.46□□□□□ -1.54
VPS4B-205ENST00000591383 EFNB3Q15768 340 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms