RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 TMEM255AQ5JRV8 349 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 SPATA46Q5T0L3 261 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 AVPI1Q5T686 147 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 FAM220AQ7Z4H9 259 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 LHFPL3Q86UP9 236 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 TEX29Q8N6K0 151 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 CMBLQ96DG6 245 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 ELMOD3Q96FG2 381 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 PGAM5Q96HS1 289 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 G6PC2Q9NQR9 355 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 CYSLTR2Q9NS75 346 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 CHCHD3Q9NX63 227 aaKnown RBP15.18■□□□□ 0.02
VAT1-208ENST00000590924 PTTG3PQ9NZH4 202 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 NUFIP1Q9UHK0 495 aaKnown RBP15.18■□□□□ 0.02
VAT1-208ENST00000590924 WIPI2Q9Y4P8 454 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 SNX5Q9Y5X3 404 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 R4GMQ9 66 aa15.18■□□□□ 0.02
VAT1-208ENST00000590924 A0A0U1RQV5 110 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 IGHV1-46P01743 117 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 ADH4P08319 380 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 LIMS3P0CW19 117 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 LIMS4P0CW20 117 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 SLC2A1P11166 492 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 MYL12AP19105 171 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 MPV17P39210 176 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 GK2Q14410 553 aaPredicted RBP15.17■□□□□ 0.02
VAT1-208ENST00000590924 TSTQ16762 297 aaKnown RBP15.17■□□□□ 0.02
VAT1-208ENST00000590924 RBM48Q5RL73 367 aaKnown RBP15.17■□□□□ 0.02
VAT1-208ENST00000590924 RNLSQ5VYX0 342 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 FAHD2BQ6P2I3 314 aaPredicted RBP15.17■□□□□ 0.02
VAT1-208ENST00000590924 FDX2Q6P4F2 183 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 FAM57BQ71RH2 274 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 PGAP1Q75T13 922 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 STX19Q8N4C7 294 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.17■□□□□ 0.02
VAT1-208ENST00000590924 MYDGFQ969H8 173 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 SGK3Q96BR1 496 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 FAHD2AQ96GK7 314 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 TIMD4Q96H15 378 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 ALG8Q9BVK2 526 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 YTHDF1Q9BYJ9 559 aaKnown RBP15.17■□□□□ 0.02
VAT1-208ENST00000590924 TTTY10Q9BZA0 68 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 POFUT1Q9H488 388 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 DUSP21Q9H596 190 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 PURGQ9UJV8 347 aaKnown RBP15.17■□□□□ 0.02
VAT1-208ENST00000590924 CAB39Q9Y376 341 aaPredicted RBP15.17■□□□□ 0.02
VAT1-208ENST00000590924 CACNG2Q9Y698 323 aa15.17■□□□□ 0.02
VAT1-208ENST00000590924 PLSCR5A0PG75 271 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 LOC110117498-PIK3R3F6TDL0 507 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 MAGEB4O15481 346 aaPredicted RBP15.16■□□□□ 0.02
VAT1-208ENST00000590924 IGHV2-5P01817 119 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 DDOSTP39656 456 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 OR12D2P58182 307 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 ZNF92Q03936 586 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 GLYATL3Q5SZD4 288 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 TMPRSS11AQ6ZMR5 421 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 C1orf229Q6ZS94 237 aaPredicted RBP15.16■□□□□ 0.02
VAT1-208ENST00000590924 MRPL21Q7Z2W9 205 aaKnown RBP15.16■□□□□ 0.02
VAT1-208ENST00000590924 ZNF418Q8TF45 676 aaPredicted RBP15.16■□□□□ 0.02
VAT1-208ENST00000590924 RORBQ92753 470 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 RAB1CQ92928 201 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 SIGLEC11Q96RL6 698 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 PBOV1Q9GZY1 135 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 BRD7Q9NPI1 651 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 ZNF319Q9P2F9 582 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 GNG8Q9UK08 70 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 LRRC42Q9Y546 428 aa15.16■□□□□ 0.02
VAT1-208ENST00000590924 A0A0G2JMP0 313 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 A0A0X1KG70 313 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 ZSCAN5BA6NJL1 495 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 IQCF6A8MYZ5 107 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 J3QLW9 94 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 TBX1O43435 398 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 SPRY3O43610 288 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 PLPP2O43688 288 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 CDK1P06493 297 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 RPSAP08865 295 aaKnown RBP15.15■□□□□ 0.02
VAT1-208ENST00000590924 ZNF19P17023 458 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 CRHBPP24387 322 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 ETV1P50549 477 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 SLC35A2P78381 396 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 HLXQ14774 488 aaPredicted RBP15.15■□□□□ 0.02
VAT1-208ENST00000590924 TIGD6Q17RP2 521 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 TP53I3Q53FA7 332 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 ZMAT1Q5H9K5 638 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 AHSA2Q719I0 299 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 CATSPERDQ86XM0 798 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 ELMOD2Q8IZ81 293 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 OR4M2Q8NGB6 313 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 C4orf36Q96KX1 117 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 DIRC2Q96SL1 478 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 TMPRSS13Q9BYE2 586 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 OR52A1Q9UKL2 312 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 BLOC1S6Q9UL45 172 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 N6AMT1Q9Y5N5 214 aa15.15■□□□□ 0.02
VAT1-208ENST00000590924 C5orf63A6NC05 138 aa15.14■□□□□ 0.01
VAT1-208ENST00000590924 PTGES3LE9PB15 166 aa15.14■□□□□ 0.01
VAT1-208ENST00000590924 RPP14O95059 124 aaKnown RBP15.14■□□□□ 0.01
VAT1-208ENST00000590924 AVPP01185 164 aa15.14■□□□□ 0.01
VAT1-208ENST00000590924 IGLV3-1P01715 115 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms