RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
CROCCP3-203ENST00000589964 MS4A7Q9GZW8 240 aaPredicted RBP13.94□□□□□ -0.18
CROCCP3-203ENST00000589964 PRR23D1E9PI22 279 aaPredicted RBP13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 GYG2O15488 501 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 PRKYO43930 277 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 E2F6O75461 281 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 H2BFMP0C1H6 154 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 PRR23D2P0DMB1 279 aaPredicted RBP13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 HKR1P10072 659 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 HSD11B1P28845 292 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 DAPP51397 102 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 MFGE8Q08431 387 aaPredicted RBP13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 APOFQ13790 326 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 WDR38Q5JTN6 314 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 BTNL3Q6UXE8 466 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 C9orf139Q6ZV77 190 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 PDZD9Q8IXQ8 264 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 RPL3LQ92901 407 aaKnown RBP13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 ERGIC1Q969X5 290 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 UTP4Q969X6 686 aaKnown RBP13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 ITPKCQ96DU7 683 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 PGAM5Q96HS1 289 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 JMJD8Q96S16 334 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 PAPOLGQ9BWT3 736 aaKnown RBP13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 SIRPDQ9H106 197 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 SLC25A19Q9HC21 320 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 LRP12Q9Y561 859 aa13.93□□□□□ -0.18
CROCCP3-203ENST00000589964 ZNF850A8MQ14 1090 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 DYNC1I1O14576 645 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 GNGT2O14610 69 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 DVL1O14640 695 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 CDIPTO14735 213 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 HOXA3O43365 443 aaPredicted RBP13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 ALOX5APP20292 161 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 SRSF4Q08170 494 aaKnown RBP13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 PRDX4Q13162 271 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 TEX36Q5VZQ5 186 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 FAHD1Q6P587 224 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 OR8S1Q8NH09 359 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 BCAS4Q8TDM0 211 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 SLC22A4Q9H015 551 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 SEMA6AQ9H2E6 1030 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 SNTG1Q9NSN8 517 aa13.92□□□□□ -0.18
CROCCP3-203ENST00000589964 TRRAPQ9Y4A5 3859 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 CENPVL3A0A0U1RRI6 287 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 ANKRD30BLA7E2S9 258 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 ENSAO43768 121 aaKnown RBP13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 LYNP07948 512 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 RNASE1P07998 156 aaKnown RBP13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 PPIAL4GP0DN37 164 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 SLC15A1P46059 708 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 BTN2A1Q7KYR7 527 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 OR10A2Q9H208 303 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 TVP23BQ9NYZ1 205 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 DNAJB9Q9UBS3 223 aa13.91□□□□□ -0.18
CROCCP3-203ENST00000589964 ZNF879B4DU55 563 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 GSC2O15499 205 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 RHBDL1O75783 438 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 MDKP21741 143 aaPredicted RBP13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 DCTDP32321 178 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 BLVRAP53004 296 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 PSMA6P60900 246 aaKnown RBP13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 RPS7P62081 194 aaKnown RBP13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 ARF6P62330 175 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 RELBQ01201 579 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 RBMS3Q6XE24 437 aaKnown RBP13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 PLEKHG7Q6ZR37 379 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 SHFQ7M4L6 423 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 PLPP7Q8NBV4 271 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 OR5P3Q8WZ94 311 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 ST8SIA4Q92187 359 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 PKP2Q99959 881 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 TLNRD1Q9H1K6 362 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 TOR3AQ9H497 397 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 ELL3Q9HB65 397 aaPredicted RBP13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 FAM206AQ9NX38 181 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 DNAJB11Q9UBS4 358 aa13.9□□□□□ -0.18
CROCCP3-203ENST00000589964 TRAV38-1A0A0B4J264 116 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 TMPRSS2O15393 492 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 PRODHO43272 600 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 AKR7A2O43488 359 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 DNAJC8O75937 253 aaPredicted RBP13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 PAICSP22234 425 aaKnown RBP13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 DDOSTP39656 456 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 CRISP1P54107 249 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 IKZF1Q13422 519 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 DNAL1Q4LDG9 190 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 STUMQ69YW2 141 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 PNKDQ8N490 385 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 PIP4P2Q8N4L2 257 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 OR52H1Q8NGJ2 320 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 WDFY2Q96P53 400 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 OPA3Q9H6K4 179 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 C14orf119Q9NWQ9 140 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 ERVK-18Q9QC07 812 aa13.89□□□□□ -0.19
CROCCP3-203ENST00000589964 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.88□□□□□ -0.19
CROCCP3-203ENST00000589964 SRRM5B3KS81 715 aa13.88□□□□□ -0.19
CROCCP3-203ENST00000589964 SRSF10O75494 262 aaKnown RBP13.88□□□□□ -0.19
CROCCP3-203ENST00000589964 TOX4O94842 621 aa13.88□□□□□ -0.19
CROCCP3-203ENST00000589964 ANXA8P13928 327 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms