RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MN1Q10571 1320 aaPredicted RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 NPIPB9F8W1W9 429 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 TOX3O15405 576 aaPredicted RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 ZNF780AO75290 641 aaPredicted RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 MAGEA5P43359 124 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 SELENOVP59797 346 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 PLPPR5Q32ZL2 321 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 MUC20Q8N307 709 aaPredicted RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 OR10R2Q8NGX6 335 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 EIF5A2Q9GZV4 153 aaKnown RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 DNAJB11Q9UBS4 358 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 IGKV1D-43A0A0B4J1Z2 117 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 MS4A18H0YCH9 400 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 SOCS1O15524 211 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 SLC34A2O95436 690 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 OR8U9P0C7N5 309 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 ADRA2CP18825 462 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 KLK2P20151 261 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 PRKACBP22694 351 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 GCH1P30793 250 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 GABRA2P47869 451 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 RAB1AP62820 205 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 EIF5AP63241 154 aaKnown RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 GSG1Q2KHT4 349 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 MS4A18Q3C1V0 323 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 PLEKHN1Q494U1 663 aaPredicted RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 ATP1A1-AS1Q5TC04 95 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 CXorf67Q86X51 503 aaPredicted RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 ZNF680Q8NEM1 530 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 INTS12Q96CB8 462 aaKnown RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 RRNAD1Q96FB5 475 aaKnown RBP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.93□□□□□ -0.34
RETREG3-208ENST00000589797 MTFP1Q9UDX5 166 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 ST3GAL6Q9Y274 331 aa12.93□□□□□ -0.34
RETREG3-208ENST00000589797 ANKRD34BA5PLL1 514 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 UPK3AO75631 287 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 TK1P04183 234 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 RAC1P63000 192 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 CD200R1LQ6Q8B3 271 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 CARFQ8N187 725 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 NELFAQ9H3P2 528 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 PTTG3PQ9NZH4 202 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 DENND4CQ5VZ89 1909 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 XIRP2A4UGR9 3374 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 CCDC187A0A096LP49 1063 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 MCRIP1C9JLW8 97 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
RETREG3-208ENST00000589797 GALP22466 123 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 PLA2G7Q13093 441 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 ARL6IP1Q15041 203 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 OR51H1Q8NH63 302 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 PHF1O43189 567 aaPredicted RBP12.92□□□□□ -0.34
RETREG3-208ENST00000589797 SERPINF1P36955 418 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 RPS4XP62701 263 aaKnown RBP12.92□□□□□ -0.34
RETREG3-208ENST00000589797 FIP1L1Q6UN15 594 aaKnown RBP12.92□□□□□ -0.34
RETREG3-208ENST00000589797 GALNT16Q8N428 558 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 TMEM178AQ8NBL3 297 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 FAAP24Q9BTP7 215 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 FAM234AQ9H0X4 552 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 TRAPPC2LQ9UL33 140 aa12.92□□□□□ -0.34
RETREG3-208ENST00000589797 OR5H14A6NHG9 310 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 PET100P0DJ07 73 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 RRADP55042 308 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 ZXDAP98168 799 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 PABPC1L2AQ5JQF8 200 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 CLVS2Q5SYC1 327 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 KCNJ15Q99712 375 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 SSX5O60225 188 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 PMS2P2O95744 297 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 HLA-DQB1P01920 261 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 CD96P40200 585 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 IGLV3-21P80748 117 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-208ENST00000589797 RBM39Q14498 530 aaKnown RBP12.91□□□□□ -0.34
RETREG3-208ENST00000589797 TRIP6Q15654 476 aaKnown RBP12.91□□□□□ -0.34
RETREG3-208ENST00000589797 DUSP18Q8NEJ0 188 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 ZNF286AQ9HBT8 521 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 FZR1Q9UM11 496 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 LOC101059948A0A1B0GTJ6 334 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 PRR32B1ATL7 298 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 NXPH2O95156 264 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 NOVA1P51513 510 aaKnown RBP12.91□□□□□ -0.34
RETREG3-208ENST00000589797 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 ZNF468Q5VIY5 522 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-208ENST00000589797 TMEM217Q8N7C4 229 aa12.91□□□□□ -0.34
RETREG3-208ENST00000589797 IGLV3-19P01714 112 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 CYCSP99999 105 aaKnown RBP12.9□□□□□ -0.34
RETREG3-208ENST00000589797 EXOSC2Q13868 293 aaKnown RBP12.9□□□□□ -0.34
RETREG3-208ENST00000589797 EDDM3AQ14507 147 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 ALKBH6Q3KRA9 238 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 SLC22A25Q6T423 547 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 MRGPREQ86SM8 312 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 OR11H7Q8NGC8 314 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 OR1F12Q8NHA8 337 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 SOX7Q9BT81 388 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 SLCO5A1Q9H2Y9 848 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 ESRP2Q9H6T0 727 aaKnown RBP12.9□□□□□ -0.34
RETREG3-208ENST00000589797 CACNA1AO00555 2505 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 SERPINA7P05543 415 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 TRAPPC2P0DI81 140 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 TRAPPC2BP0DI82 140 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms