RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
SMARCA4-214ENST00000589677 CST7O76096 145 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 SDHBP21912 280 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 EMDP50402 254 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 TMEM33P57088 247 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 ABHD17BQ5VST6 288 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 KIRREL2Q6UWL6 708 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 NUBPLQ8TB37 319 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 PIK3IP1Q96FE7 263 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 A0A0B4J2E0 115 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 A0A1B0GX12 115 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 PGFP49763 221 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 FAM122AQ96E09 287 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 SIRT3Q9NTG7 399 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 HIST1H1DP16402 221 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 PMCHP20382 165 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 TNFSF4P23510 183 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 GDF1P27539 372 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 OR10J1P30954 320 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 OTX2P32243 289 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 FOLR3P41439 243 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 LINC00615Q96LM1 132 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 RREB1Q92766 1687 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 DUXBA0A1W2PPF3 345 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 CXCL2P19875 107 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 WDR38Q5JTN6 314 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 RGS7BPQ6MZT1 257 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 MAML2Q8IZL2 1156 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 CA5BP1Q8WTZ4 195 aa13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 MRPS18AQ9NVS2 196 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-214ENST00000589677 A0A087WUJ7 227 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 SLC25A6P12236 298 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 DRD1P21728 446 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 PPICP45877 212 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 CEBPEQ15744 281 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 LAIR1Q6GTX8 287 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 TNFSF18Q9UNG2 199 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 OR5H15A6NDH6 313 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 OR5H1A6NKK0 313 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 MPTX1A8MV57 137 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 ENPP1P22413 925 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 FAM26DQ5JW98 314 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 OR10A7Q8NGE5 316 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 ALX4Q9H161 411 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 TMEM9BQ9NQ34 198 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 C4orf47A7E2U8 309 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 VAMP5O95183 116 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 NAAAQ02083 359 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 SLC25A42Q86VD7 318 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 FBXO34Q9NWN3 711 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 MARCH5Q9NX47 278 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 NAT8Q9UHE5 227 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 ING1Q9UK53 422 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 KCNE3Q9Y6H6 103 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 PRAMEF5Q5TYX0 476 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 PRAMEF6Q5VXH4 476 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 ZNF813Q6ZN06 617 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 EMC6Q9BV81 110 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 LRP12Q9Y561 859 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 PIAS3Q9Y6X2 628 aa13.16□□□□□ -0.3
SMARCA4-214ENST00000589677 CLEC18AA5D8T8 446 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 LANCL1O43813 399 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 GLRA1P23415 457 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 THBS4P35443 961 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 CLEC18CQ8NCF0 446 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 HIF1ANQ9NWT6 349 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 FKBP11Q9NYL4 201 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 COL22A1Q8NFW1 1626 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 PQLC2LA1A4F0 135 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 OR2J2O76002 312 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 ABLIM3O94929 683 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 DAOP14920 347 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 PMP22Q01453 160 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 SURF2Q15527 256 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 UBE2V2Q15819 145 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 LTC4SQ16873 150 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 PLAC9Q5JTB6 97 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 FAM174AQ8TBP5 190 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 ANAPC16Q96DE5 110 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 RAB40CQ96S21 281 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 TOGARAM1Q9Y4F4 1720 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 A0A1W2PNV4 684 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 M0R135 149 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 GPANK1O95872 356 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 ACAA1P09110 424 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 B4GALNT1Q00973 533 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 OR2C3Q8N628 320 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 ST8SIA1Q92185 356 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 IL22RA2Q969J5 263 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 TPPP3Q9BW30 176 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 RAB33BQ9H082 229 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 SMDT1Q9H4I9 107 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 PPP1R3CQ9UQK1 317 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 PLSCR5A0PG75 271 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 K7ESM1 405 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms