RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 IL5RAQ01344 420 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 NCR3LG1Q68D85 454 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 STUMQ69YW2 141 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 SLC35E4Q6ICL7 350 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 RASSF6Q6ZTQ3 369 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 LNX2Q8N448 690 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 Q8N7P7 452 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 FAM110DQ8TAY7 271 aaPredicted RBP11.47□□□□□ -0.57
VMP1-209ENST00000588915 ZNRF4Q8WWF5 429 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 MED30Q96HR3 178 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 REEP6Q96HR9 211 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 NMNAT2Q9BZQ4 307 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 RGCCQ9H4X1 137 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 EGLN3Q9H6Z9 239 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 SIRT7Q9NRC8 400 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 HAO2Q9NYQ3 351 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 ADA2Q9NZK5 511 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 BAIAP2Q9UQB8 552 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 MPC1Q9Y5U8 109 aa11.47□□□□□ -0.57
VMP1-209ENST00000588915 MEIOCA2RUB1 952 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 ANKRD61A6NGH8 418 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 ACOT8O14734 319 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 TBX1O43435 398 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 SPARCP09486 303 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 SLC2A1P11166 492 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 AMY2BP19961 511 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 GNALP38405 381 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 KIR2DS4P43632 304 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 HERPUD1Q15011 391 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 Q6ZTK2 550 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 SLC37A3Q8NCC5 494 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 BEND2Q8NDZ0 799 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 OR51L1Q8NGJ5 315 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 OR9Q1Q8NGQ5 310 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 NSMCE2Q96MF7 247 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 MICU1Q9BPX6 476 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 FAM234AQ9H0X4 552 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 MYLK2Q9H1R3 596 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 METTL8Q9H825 291 aaKnown RBP11.46□□□□□ -0.57
VMP1-209ENST00000588915 ABCB9Q9NP78 766 aa11.46□□□□□ -0.57
VMP1-209ENST00000588915 hCG_38984A0A1B0GV85 526 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 A0A1B0GW55 424 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 DHRS12A0PJE2 317 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 TMEM210A6NLX4 147 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 ANXA2P2A6NMY6 339 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 CDIPTO14735 213 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 OPN1MWP04001 364 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 ANXA2P07355 339 aaKnown RBP11.45□□□□□ -0.58
VMP1-209ENST00000588915 DUX4L2P0CJ85 424 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 DUX4L3P0CJ86 424 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 DUX4L4P0CJ87 422 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 DUX4L5P0CJ88 424 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 DUX4L6P0CJ89 424 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 DUX4L7P0CJ90 424 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 PSKH1P11801 424 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 HSD11B1P28845 292 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 GABRA5P31644 462 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 SAA4P35542 130 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 CX3CR1P49238 355 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 GSK3AP49840 483 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 CAV3P56539 151 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 CSNK2BP67870 215 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 EGR3Q06889 387 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 BLMHQ13867 455 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 AANATQ16613 207 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 SPATS1Q496A3 300 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 FAM76BQ5HYJ3 339 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 KPRPQ5T749 579 aaPredicted RBP11.45□□□□□ -0.58
VMP1-209ENST00000588915 DUX4L9Q6RFH8 374 aaPredicted RBP11.45□□□□□ -0.58
VMP1-209ENST00000588915 LYPD4Q6UWN0 246 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 ZNF788Q6ZQV5 615 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 PRSS45Q7RTY3 260 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 REC114Q7Z4M0 266 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 C1QL4Q86Z23 238 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 FGFRL1Q8N441 504 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 RNF148Q8N7C7 305 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 FAM216BQ8N7L0 139 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 ZNF511Q8NB15 262 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 RNF133Q8WVZ7 376 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 ITFG2Q969R8 447 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 ITPKCQ96DU7 683 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 RAB3IPQ96QF0 476 aaPredicted RBP11.45□□□□□ -0.58
VMP1-209ENST00000588915 OR10A2Q9H208 303 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 SEMA6AQ9H2E6 1030 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 DUX4Q9UBX2 424 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 SF3B6Q9Y3B4 125 aaKnown RBP11.45□□□□□ -0.58
VMP1-209ENST00000588915 N6AMT1Q9Y5N5 214 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 V9GYQ6 96 aa11.45□□□□□ -0.58
VMP1-209ENST00000588915 SPI1P17947 270 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 IKZF1Q13422 519 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 CRMP1Q14194 572 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 BEAN1Q3B7T3 259 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 KLHL12Q53G59 568 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 SAMD4BQ5PRF9 694 aaKnown RBP11.44□□□□□ -0.58
VMP1-209ENST00000588915 SHFQ7M4L6 423 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 OR5D13Q8NGL4 314 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 BTBD10Q9BSF8 475 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms