RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 RFPL3SP0C7P2 107 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 UBCP0CG48 685 aaKnown RBP12.87□□□□□ -0.35
CCDC43-203ENST00000588210 HLA-DOBP13765 273 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 MAGEA5P43359 124 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 DAP3P51398 398 aaKnown RBP12.87□□□□□ -0.35
CCDC43-203ENST00000588210 CLVS2Q5SYC1 327 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 TMEM244Q5VVB8 128 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 LPCAT3Q6P1A2 487 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 JAGN1Q8N5M9 183 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.87□□□□□ -0.35
CCDC43-203ENST00000588210 WDSUB1Q8N9V3 476 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 STEAP2Q8NFT2 490 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 OR5M8Q8NGP6 311 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 FOXRED1Q96CU9 486 aaPredicted RBP12.87□□□□□ -0.35
CCDC43-203ENST00000588210 GNRHR2Q96P88 292 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 SLC2A8Q9NY64 477 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 ANKUB1A6NFN9 424 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 J3QKU1 62 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 CBR3O75828 277 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 IL11P20809 199 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 AGTR1P30556 359 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 SPOCK1Q08629 439 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 C17orf67Q0P5P2 114 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 MEF2DQ14814 521 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 SLC10A1Q14973 349 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 MOGAT2Q3SYC2 334 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 DCXRQ7Z4W1 244 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 EIF4E3Q8N5X7 224 aaKnown RBP12.87□□□□□ -0.35
CCDC43-203ENST00000588210 OR1J2Q8NGS2 313 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 OR13C8Q8NGS7 320 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 OR1S1Q8NH92 325 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 ST8SIA1Q92185 356 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 AQP3Q92482 292 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 PLSCR2Q9NRY7 297 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 COQ3Q9NZJ6 369 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 PPP4R1LQ9P1A2 415 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 MS4A18H0YCH9 400 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 WISP2O76076 250 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 UBBP0CG47 229 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 MPZP25189 248 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 GDF1P27539 372 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 RPS27AP62979 156 aaKnown RBP12.86□□□□□ -0.35
CCDC43-203ENST00000588210 UBA52P62987 128 aaKnown RBP12.86□□□□□ -0.35
CCDC43-203ENST00000588210 FMODQ06828 376 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 FGL1Q08830 312 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 ZMYND11Q15326 602 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 MS4A18Q3C1V0 323 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 RAB12Q6IQ22 244 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 TMED4Q7Z7H5 227 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 PDZD9Q8IXQ8 264 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 BPIFB2Q8N4F0 458 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 BVESQ8NE79 360 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 KCNK17Q96T54 332 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 ACKR4Q9NPB9 350 aa12.86□□□□□ -0.35
CCDC43-203ENST00000588210 IGHG3P01860 377 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 MGMTP16455 207 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 PRKACBP22694 351 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 DHRS2Q13268 280 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF584Q8IVC4 421 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 OR4D6Q8NGJ1 314 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 MFSD8Q8NHS3 518 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 GAL3ST1Q99999 423 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 SHARPINQ9H0F6 387 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 GDF2Q9UK05 429 aaPredicted RBP12.85□□□□□ -0.35
CCDC43-203ENST00000588210 A0A0D9SG52 128 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 TMEM269A0A1B0GVZ9 245 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 TMEM235A6NFC5 223 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 DISC1C4P0D8 188 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 LMX1BO60663 402 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 HPNP05981 417 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 CD34P28906 385 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 MMP16P51512 607 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 SUMO3P55854 103 aaPredicted RBP12.85□□□□□ -0.35
CCDC43-203ENST00000588210 RBPJQ06330 500 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF345Q14585 488 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 TUSC1Q2TAM9 212 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 OR10K2Q6IF99 312 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 LRFN4Q6PJG9 635 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 LINC00346Q8IVM7 164 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 KDM8Q8N371 416 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 RNF133Q8WVZ7 376 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 DMRTA2Q96SC8 542 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 SLC6A7Q99884 636 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 PRRT1Q99946 306 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 SLC25A32Q9H2D1 315 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 RAB22AQ9UL26 194 aa12.85□□□□□ -0.35
CCDC43-203ENST00000588210 PRRC2CQ9Y520 2896 aaKnown RBP12.85□□□□□ -0.35
CCDC43-203ENST00000588210 IGLV3-32A0A0A0MS00 114 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 METTL21EPA6NDL7 271 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 P2RY10O00398 339 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 TRAPPC6AO75865 159 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 SPDEFO95238 335 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 RLN2P04090 185 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 CELA3AP09093 270 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 SLC25A4P12235 298 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 GNLYP22749 145 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 HSD11B1P28845 292 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms