RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 TRIM16LQ309B1 348 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 WDR38Q5JTN6 314 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 HACD4Q5VWC8 232 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 OR7E24Q6IFN5 339 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 C11orf71Q6IPW1 123 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 AAED1Q7RTV5 226 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 DPPA2Q7Z7J5 298 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.77□□□□□ -1.33
VMP1-204ENST00000587259 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 DTX2Q86UW9 622 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 CATSPERDQ86XM0 798 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 LAX1Q8IWV1 398 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 HSD17B8Q92506 261 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 ITFG2Q969R8 447 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 TMEM106AQ96A25 262 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 MAP6Q96JE9 813 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 ATF6BQ99941 703 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 LINC00470Q9BZP3 86 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 HDHD2Q9H0R4 259 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 ZCCHC4Q9H5U6 513 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 GLRX2Q9NS18 164 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 DDX28Q9NUL7 540 aaKnown RBP6.77□□□□□ -1.33
VMP1-204ENST00000587259 TBCCD1Q9NVR7 557 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 ATPIF1Q9UII2 106 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 DAPK2Q9UIK4 370 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 GTF2A1LQ9UNN4 478 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 FOXJ3Q9UPW0 622 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 DHDHQ9UQ10 334 aa6.77□□□□□ -1.33
VMP1-204ENST00000587259 TRBV5-7A0A0A0MS05 114 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 ANXA2P2A6NMY6 339 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 PRR32B1ATL7 298 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 J3QRK9 145 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 PSMD9O00233 223 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 MRPL33O75394 65 aaKnown RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 RAD51DO75771 328 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 KRT33AO76009 404 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 ANXA2P07355 339 aaKnown RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 YES1P07947 543 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 ERCC1P07992 297 aaPredicted RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 CALCBP10092 127 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 NTF4P34130 210 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 NANOS3P60323 173 aaKnown RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 SCN1BQ07699 218 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 UBE2NLQ5JXB2 153 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 IDNKQ5T6J7 187 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 FAM27BQ5VT28 67 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 C9orf135Q5VTT2 229 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 CARD17Q5XLA6 110 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 FAM131AQ6UXB0 335 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 LINC00346Q8IVM7 164 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 ZNF671Q8TAW3 534 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 SPTSSAQ969W0 71 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 FOXRED1Q96CU9 486 aaPredicted RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 ZNF385AQ96PM9 386 aaKnown RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 DCLRE1CQ96SD1 692 aaKnown RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 KCNJ15Q99712 375 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 SOX7Q9BT81 388 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 OR10A4Q9H209 315 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 BCO1Q9HAY6 547 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 ABCB9Q9NP78 766 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 NOX4Q9NPH5 578 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 CENPMQ9NSP4 180 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 COMMD3Q9UBI1 195 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 ASH2LQ9UBL3 628 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 NUFIP1Q9UHK0 495 aaKnown RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 ZNF391Q9UJN7 358 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 CDC42EP3Q9UKI2 254 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 OR52A1Q9UKL2 312 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 SPATA2Q9UM82 520 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 NOSIPQ9Y314 301 aaKnown RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 LHFPL6Q9Y693 200 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 V9GY05 133 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 YLPM1P49750 1951 aaKnown RBP6.76□□□□□ -1.33
VMP1-204ENST00000587259 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
VMP1-204ENST00000587259 A0A1B0GVI7 797 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 IFITM5A6NNB3 132 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 FAM25AB3EWG3 89 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 FAM25CB3EWG5 89 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 FAM25GB3EWG6 89 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 ZNF587BE7ETH6 402 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 M0R1B8 84 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 CTDSP2O14595 271 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 MAGEB4O15481 346 aaPredicted RBP6.75□□□□□ -1.33
VMP1-204ENST00000587259 TBX1O43435 398 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 SRSF10O75494 262 aaKnown RBP6.75□□□□□ -1.33
VMP1-204ENST00000587259 GPANK1O95872 356 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 CST2P09228 141 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 CLEC2LP0C7M8 214 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 OCMP0CE72 109 aaPredicted RBP6.75□□□□□ -1.33
VMP1-204ENST00000587259 RPS27P42677 84 aaKnown RBP6.75□□□□□ -1.33
VMP1-204ENST00000587259 KIR3DL2P43630 455 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 OR3A2P47893 321 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 INPP1P49441 399 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 SELENOPP49908 381 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 MRPS10P82664 201 aaKnown RBP6.75□□□□□ -1.33
VMP1-204ENST00000587259 RAB35Q15286 201 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 FAM189A2Q15884 450 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 CEP78Q5JTW2 689 aa6.75□□□□□ -1.33
VMP1-204ENST00000587259 TRIQKQ629K1 86 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms