RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 COMMD3-BMI1R4GMX3 469 aa11.85□□□□□ -0.51
SDF2-202ENST00000585428 CDIPTO14735 213 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 NDUFB3O43676 98 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 GASTP01350 101 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 CSF1P09603 554 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 EEF1B2P24534 225 aaKnown RBP11.84□□□□□ -0.51
SDF2-202ENST00000585428 FMO3P31513 532 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 NAA10P41227 235 aaPredicted RBP11.84□□□□□ -0.51
SDF2-202ENST00000585428 ENTPD1P49961 510 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 UBE2E1P51965 193 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 CSNK2BP67870 215 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 PRB3Q04118 309 aaPredicted RBP11.84□□□□□ -0.51
SDF2-202ENST00000585428 TAF13Q15543 124 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 KLHL12Q53G59 568 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 FAM76BQ5HYJ3 339 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 STUMQ69YW2 141 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 RPL13AP3Q6NVV1 102 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 GALNT4Q8N4A0 578 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 OR5T2Q8NGG2 359 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 PPP1R35Q8TAP8 253 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 DNTTIP1Q9H147 329 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 MYLK2Q9H1R3 596 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 ARGLU1Q9NWB6 273 aaPredicted RBP11.84□□□□□ -0.51
SDF2-202ENST00000585428 HAO2Q9NYQ3 351 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 ZNF319Q9P2F9 582 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 RHBDD3Q9Y3P4 386 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 CDH10Q9Y6N8 788 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 V9GYQ6 96 aa11.84□□□□□ -0.51
SDF2-202ENST00000585428 hCG_38984A0A1B0GV85 526 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 DHRS12A0PJE2 317 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 BTBD17A6NE02 478 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 ZNF878C9JN71 531 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 KRT36O76013 467 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 FABP3P05413 133 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 SPARCP09486 303 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 HSD17B1P14061 328 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 SLC15A1P46059 708 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 GSK3AP49840 483 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 SLC25A1P53007 311 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 GRB2P62993 217 aaKnown RBP11.83□□□□□ -0.52
SDF2-202ENST00000585428 ACSM1Q08AH1 577 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 IKZF1Q13422 519 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 BEAN1Q3B7T3 259 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 LRRC10Q5BKY1 277 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 KPRPQ5T749 579 aaPredicted RBP11.83□□□□□ -0.52
SDF2-202ENST00000585428 ZNF770Q6IQ21 691 aaPredicted RBP11.83□□□□□ -0.52
SDF2-202ENST00000585428 ZNF788Q6ZQV5 615 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 OR8D4Q8NGM9 314 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 OR9Q1Q8NGQ5 310 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 OR5R1Q8NH85 324 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 MCUR1Q96AQ8 359 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 REEP6Q96HR9 211 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 AJUBAQ96IF1 538 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 BTBD10Q9BSF8 475 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 DNAJB11Q9UBS4 358 aa11.83□□□□□ -0.52
SDF2-202ENST00000585428 A0A1W2PRD5 423 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 A0A1W2PRF3 423 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 A0A1W2PRM7 423 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 G3V4G9 280 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 TBX1O43435 398 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 OPN1MWP04001 364 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 GYPBP06028 91 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 OPN1MW2P0DN77 364 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 OPN1MW3P0DN78 364 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 SELLP14151 372 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 PRDX6P30041 224 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 SAA4P35542 130 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 MSX2P35548 267 aaPredicted RBP11.82□□□□□ -0.52
SDF2-202ENST00000585428 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 CX3CR1P49238 355 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 KLRD1Q13241 179 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 HERPUD1Q15011 391 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 LINC01590Q5TEZ4 76 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 RASSF6Q6ZTQ3 369 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 PNKDQ8N490 385 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 BEND2Q8NDZ0 799 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 OR52L1Q8NGH7 329 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 OR52H1Q8NGJ2 320 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 CFHR4Q92496 578 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 KCTD12Q96CX2 325 aaKnown RBP11.82□□□□□ -0.52
SDF2-202ENST00000585428 ITPKCQ96DU7 683 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 MED30Q96HR3 178 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 RAB3IPQ96QF0 476 aaPredicted RBP11.82□□□□□ -0.52
SDF2-202ENST00000585428 WDR13Q9H1Z4 485 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 PPA2Q9H2U2 334 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 TOR3AQ9H497 397 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 SP140LQ9H930 580 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 MAGEL2Q9UJ55 1249 aa11.82□□□□□ -0.52
SDF2-202ENST00000585428 MEIOCA2RUB1 952 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 ANKRD61A6NGH8 418 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 M0R1W7 72 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 ACAA1P09110 424 aaPredicted RBP11.81□□□□□ -0.52
SDF2-202ENST00000585428 CLUP10909 449 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 SPI1P17947 270 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 CFL1P23528 166 aaKnown RBP11.81□□□□□ -0.52
SDF2-202ENST00000585428 EFNB2P52799 333 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 BLVRAP53004 296 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 CAV3P56539 151 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 MXRA7P84157 204 aa11.81□□□□□ -0.52
SDF2-202ENST00000585428 CRMP1Q14194 572 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms