RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CST4P01036 141 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 GALP22466 123 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 ALKBH6Q3KRA9 238 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 CLVS2Q5SYC1 327 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 CEACAM19Q7Z692 300 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 SERPINA12Q8IW75 414 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 OR13G1Q8NGZ3 307 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 PIGCQ92535 297 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 PIGTQ969N2 578 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 YIPF6Q96EC8 236 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 ABCB9Q9NP78 766 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 CKLFQ9UBR5 152 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 SSR3Q9UNL2 185 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 MPC1Q9Y5U8 109 aa15.65■□□□□ 0.1
RFFL-211ENST00000584541 ABCA4P78363 2273 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 TRDV1A0A1B0GX56 115 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 A6NIN4 97 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 ANXA2P2A6NMY6 339 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 GABRPO00591 440 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 NRASP01111 189 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 RAF1P04049 648 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 TGFBR2P37173 567 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 FABP5Q01469 135 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 PTPN13Q12923 2485 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 SPTAN1Q13813 2472 aaKnown RBP15.64■□□□□ 0.09
RFFL-211ENST00000584541 TMEM255AQ5JRV8 349 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 UNQ9370/PRO34162Q6UXP9 181 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 PARP16Q8N5Y8 322 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 OR5D14Q8NGL3 314 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 PHYHIPQ92561 330 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 TMIGD2Q96BF3 282 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 ADAT3Q96EY9 351 aaPredicted RBP15.64■□□□□ 0.09
RFFL-211ENST00000584541 TECTBQ96PL2 329 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 DERL3Q96Q80 235 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 HIST1H2AAQ96QV6 131 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 COL12A1Q99715 3063 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 SLC30A2Q9BRI3 323 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 MS4A5Q9H3V2 200 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 PLEKHF2Q9H8W4 249 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 EXOSC4Q9NPD3 245 aaKnown RBP15.64■□□□□ 0.09
RFFL-211ENST00000584541 HECTD1Q9ULT8 2610 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 RHBDD3Q9Y3P4 386 aa15.64■□□□□ 0.09
RFFL-211ENST00000584541 USP9YO00507 2555 aaPredicted RBP15.63■□□□□ 0.09
RFFL-211ENST00000584541 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.63■□□□□ 0.09
RFFL-211ENST00000584541 ANKRD61A6NGH8 418 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 ZNF850A8MQ14 1090 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 GMDSO60547 372 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 ARL6IP5O75915 188 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 DANCRP0C864 163 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 OCMP0CE72 109 aaPredicted RBP15.63■□□□□ 0.09
RFFL-211ENST00000584541 CA6P23280 308 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 GADD45AP24522 165 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 ALDH3B1P43353 468 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 MAGEB1P43366 347 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 ZNF81P51508 661 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 MMP15P51511 669 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 PRDX4Q13162 271 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 OR8G1Q15617 311 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 SWI5Q1ZZU3 235 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 MST1LQ2TV78 715 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 ZNF787Q6DD87 383 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 CD200R1LQ6Q8B3 271 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 KRT74Q7RTS7 529 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 DTX2Q86UW9 622 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 ZDHHC23Q8IYP9 409 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 OR8S1Q8NH09 359 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 DIRC2Q96SL1 478 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 CHST5Q9GZS9 411 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 ZCCHC4Q9H5U6 513 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 NEK6Q9HC98 313 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 MSL2Q9HCI7 577 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 ZDHHC8Q9ULC8 765 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 LAMP3Q9UQV4 416 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 GSTK1Q9Y2Q3 226 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 PMF1-BGLAPU3KQ54 211 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 DSCAMO60469 2012 aa15.63■□□□□ 0.09
RFFL-211ENST00000584541 TRBV5-7A0A0A0MS05 114 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 LILRA1O75019 489 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 SC5DO75845 299 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 TNFSF4P23510 183 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 CRYBB2P43320 205 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 PPP3R1P63098 170 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 MZT1Q08AG7 82 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 INSL4Q14641 139 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 CNN3Q15417 329 aaKnown RBP15.62■□□□□ 0.09
RFFL-211ENST00000584541 HSD17B12Q53GQ0 312 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 PLCXD3Q63HM9 321 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 TMEM42Q69YG0 159 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 HIST2H2BCQ6DN03 193 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 TMEM91Q6ZNR0 172 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 GDPGP1Q6ZNW5 385 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 MOB3CQ70IA8 216 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 UTS2BQ765I0 119 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 SPERTQ8NA61 448 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 CHCHD6Q9BRQ6 235 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 ADAT1Q9BUB4 502 aaKnown RBP15.62■□□□□ 0.09
RFFL-211ENST00000584541 TRAF4Q9BUZ4 470 aaPredicted RBP15.62■□□□□ 0.09
RFFL-211ENST00000584541 FUNDC2Q9BWH2 189 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 SLITRK2Q9H156 845 aa15.62■□□□□ 0.09
RFFL-211ENST00000584541 OR51E2Q9H255 320 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms