RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MED29Q9NX70 200 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 A0A087WUJ7 227 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 SERTM2A0A1B0GWG4 89 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 TMEM11P17152 192 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 CD27P26842 260 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 ADPRHP54922 357 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 CLDN15P56746 228 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 ZNF596Q8TC21 504 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 SIGLEC7Q9Y286 467 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 MPC2O95563 127 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 CCKARP32238 428 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 ERVFC1-1P60608 527 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 TMEM241Q24JQ0 296 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 OR2B11Q5JQS5 317 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 B3GNTL1Q67FW5 361 aaPredicted RBP11.76□□□□□ -0.53
RNF43-208ENST00000584437 Q7L0L9 218 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 UBE3DQ7Z6J8 389 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 SPSB1Q96BD6 273 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 ARSGQ96EG1 525 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 CXorf51AA0A1B0GTR3 108 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 SMIM6P0DI80 62 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 SLC6A1P30531 599 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 SLC25A26Q70HW3 274 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 OR5AS1Q8N127 324 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 BATF2Q8N1L9 274 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 NT5CQ8TCD5 201 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 KCNE4Q8WWG9 221 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 FAM210BQ96KR6 192 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 HDGFL3Q9Y3E1 203 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 MMP24Q9Y5R2 645 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 NUP98P52948 1817 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 CST7O76096 145 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 CLN3Q13286 438 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 MSRB3Q8IXL7 192 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 FAM24BQ8N5W8 94 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 OR6S1Q8NH40 331 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 TMEM37Q8WXS4 190 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 NOL4LQ96MY1 436 aaPredicted RBP11.76□□□□□ -0.53
RNF43-208ENST00000584437 ARID1BQ8NFD5 2236 aaPredicted RBP11.76□□□□□ -0.53
RNF43-208ENST00000584437 DUS4LO95620 317 aaKnown RBP11.76□□□□□ -0.53
RNF43-208ENST00000584437 NDUFB7P17568 137 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 PELI1Q96FA3 418 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 ZC3HAV1LQ96H79 300 aaKnown RBP11.76□□□□□ -0.53
RNF43-208ENST00000584437 GPR137Q96N19 417 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 RAB40CQ96S21 281 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 NXF2Q9GZY0 626 aaKnown RBP11.76□□□□□ -0.53
RNF43-208ENST00000584437 SLC6A13Q9NSD5 602 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 LRP12Q9Y561 859 aa11.76□□□□□ -0.53
RNF43-208ENST00000584437 A0A1W2PNR3 127 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 SERTM1A2A2V5 107 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 C9orf170A2RU37 121 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 MASP2O00187 686 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 DHHO43323 396 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 IGHA2P01877 340 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 GALR1P47211 349 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 PPP1R1AQ13522 171 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 HES1Q14469 280 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 OR2A1Q8NGT9 310 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 ADGRG7Q96K78 797 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 C12orf49Q9H741 205 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 IGHV3-20A0A0C4DH32 117 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 LEUTXA8MZ59 168 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 CTDSPLO15194 276 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 CYC1P08574 325 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 FUT3P21217 361 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 FAM53BQ14153 422 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 FAHD2BQ6P2I3 314 aaPredicted RBP11.75□□□□□ -0.53
RNF43-208ENST00000584437 PIK3IP1Q96FE7 263 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 FAHD2AQ96GK7 314 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 ZMAT5Q9UDW3 170 aaKnown RBP11.75□□□□□ -0.53
RNF43-208ENST00000584437 ING1Q9UK53 422 aaPredicted RBP11.75□□□□□ -0.53
RNF43-208ENST00000584437 ANKRD20A5PA0PJZ0 165 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 IDSB3KWA1 339 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 IL13RA2Q14627 380 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 CPEB3Q8NE35 698 aaKnown RBP11.75□□□□□ -0.53
RNF43-208ENST00000584437 MS4A10Q96PG2 267 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 MRPS2Q9Y399 296 aaKnown RBP11.75□□□□□ -0.53
RNF43-208ENST00000584437 GSTZ1O43708 216 aaPredicted RBP11.75□□□□□ -0.53
RNF43-208ENST00000584437 GLRA1P23415 457 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 OR1D5P58170 312 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
RNF43-208ENST00000584437 LINC00696Q6ZRV3 163 aa11.75□□□□□ -0.53
RNF43-208ENST00000584437 A0A0B4J2E0 115 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 UBE2L5PA0A1B0GUS4 154 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 A0A1B0GX12 115 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 CST2P09228 141 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 CD96P40200 585 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 PET117Q6UWS5 81 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 BVESQ8NE79 360 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 CCDC74AQ96AQ1 378 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 OR5V1Q9UGF6 321 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 PRSS23O95084 383 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 HIST1H1DP16402 221 aaKnown RBP11.74□□□□□ -0.53
RNF43-208ENST00000584437 PNRC1Q12796 327 aaPredicted RBP11.74□□□□□ -0.53
RNF43-208ENST00000584437 VWA2Q5GFL6 755 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 TTC9Q92623 222 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 UQCC1Q9NVA1 299 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 OR51B4Q9Y5P0 310 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms