RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 UCHL1P09936 223 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SELEP16581 610 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 KITLGP21583 273 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MAPK3P27361 379 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 GCH1P30793 250 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TMBIM6P55061 237 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CTF1Q16619 201 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TMEM255AQ5JRV8 349 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZBTB37Q5TC79 503 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 C22orf42Q6IC83 251 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 OR2T2Q6IF00 324 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 VHLLQ6RSH7 139 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PARP16Q8N5Y8 322 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SYNPRQ8TBG9 265 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 THRSPQ92748 146 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 NEUROG1Q92886 237 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ADAT3Q96EY9 351 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CENPOQ9BU64 300 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RBM38Q9H0Z9 239 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF442Q9H7R0 627 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 NOX4Q9NPH5 578 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CA10Q9NS85 328 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 POU2F3Q9UKI9 436 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FZR1Q9UM11 496 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 GSTK1Q9Y2Q3 226 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CMAHPQ9Y471 501 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 A6NIN4 97 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 VSTM5A8MXK1 200 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 IQCF6A8MYZ5 107 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 GABARAPO95166 117 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 GOSR1O95249 250 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CD2P06729 351 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 LSM3P62310 102 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TESK1Q15569 626 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ALKBH6Q3KRA9 238 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FAM27D1Q5T7N8 215 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 LRP11Q86VZ4 500 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SERPINA12Q8IW75 414 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CSNK2A3Q8NEV1 391 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 OR56B2PQ8NGI1 322 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TMEM106AQ96A25 262 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RNF167Q9H6Y7 350 aa14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PURGQ9UJV8 347 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-228ENST00000583363 IGLV3-9A0A075B6K5 115 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FAM221AA4D161 298 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ANKRD61A6NGH8 418 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 A6NNC1 897 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CST4P01036 141 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 IGHV3-13P01766 116 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FAHP16930 419 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SRMP19623 302 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SSTR2P30874 369 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ADIPOQQ15848 244 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF672Q499Z4 452 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TMEM42Q69YG0 159 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ASPHD2Q6ICH7 369 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF420Q8TAQ5 688 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RAB2BQ8WUD1 216 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MRPL24Q96A35 216 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ORAI1Q96D31 301 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 BCL7BQ9BQE9 202 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CISD1Q9NZ45 108 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 DUSP13Q9UII6 198 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FOXJ3Q9UPW0 622 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RHBDD3Q9Y3P4 386 aa13.99□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF816-ZNF321PA0A0X1KG74 233 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 LILRA1O75019 489 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ARL6IP5O75915 188 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 OR4A8P0C604 315 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF20P17024 532 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 IGFBP3P17936 291 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 APOBEC3AP31941 199 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SELENOVP59797 346 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 HSD17B12Q53GQ0 312 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF529Q6P280 563 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 UTS2BQ765I0 119 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 OR5AS1Q8N127 324 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 OR5D14Q8NGL3 314 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PIGCQ92535 297 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PIGTQ969N2 578 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ISOC1Q96CN7 298 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 DGCR14Q96DF8 476 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 KCTD7Q96MP8 289 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 DHRS9Q9BPW9 319 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MRPL37Q9BZE1 423 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZCCHC4Q9H5U6 513 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PLEKHA1Q9HB21 404 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TAS2R4Q9NYW5 299 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MRPL15Q9P015 296 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 NF1P21359 2839 aa13.98□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MTORP42345 2549 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ABCA4P78363 2273 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TRAV1-2A0A0B4J238 106 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SHISA3A0PJX4 238 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 GMDSO60547 372 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ALX3O95076 343 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CALRP27797 417 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TGFBR1P36897 503 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SERPINF1P36955 418 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 GNALP38405 381 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms