RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 NRIP3Q9NQ35 241 aa10.11□□□□□ -0.79
TOP3A-215ENST00000583328 IL20Q9NYY1 176 aa10.11□□□□□ -0.79
TOP3A-215ENST00000583328 ONECUT1Q9UBC0 465 aa10.11□□□□□ -0.79
TOP3A-215ENST00000583328 RPUSD1Q9UJJ7 312 aaKnown RBP10.11□□□□□ -0.79
TOP3A-215ENST00000583328 ADAM18Q9Y3Q7 739 aa10.11□□□□□ -0.79
TOP3A-215ENST00000583328 KMT2CQ8NEZ4 4911 aaKnown RBP10.11□□□□□ -0.79
TOP3A-215ENST00000583328 RNASEK-C17orf49H0YIS7 233 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 CA6P23280 308 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 CENPAP49450 140 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 RPS6KA3P51812 740 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 PRB3Q04118 309 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-215ENST00000583328 POU4F2Q12837 409 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 MALLQ13021 153 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 GK2Q14410 553 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-215ENST00000583328 MESTQ5EB52 335 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 GPR139Q6DWJ6 353 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 FAM122BQ7Z309 247 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 ZNF570Q96NI8 536 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 OSBPL10Q9BXB5 764 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 SLC22A4Q9H015 551 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 HDHD2Q9H0R4 259 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 EGLN3Q9H6Z9 239 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 SIRT7Q9NRC8 400 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 TBC1D23Q9NUY8 699 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 DNAJB11Q9UBS4 358 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 OAZ3Q9UMX2 235 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 NOP16Q9Y3C1 178 aaKnown RBP10.1□□□□□ -0.79
TOP3A-215ENST00000583328 PLXNB1O43157 2135 aa10.1□□□□□ -0.79
TOP3A-215ENST00000583328 SAC3D1A6NKF1 404 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 F5H5K5 113 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 IMPA2O14732 288 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 NPFFO15130 113 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 ARPC3O15145 178 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 IDH3BO43837 385 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 SOX14O95416 240 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 PPP1R3DO95685 299 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 TXNDC12O95881 172 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 LCATP04180 440 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 SDHAP31040 664 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 EFNB2P52799 333 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 ELF3P78545 371 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-215ENST00000583328 KRR1Q13601 381 aaKnown RBP10.09□□□□□ -0.79
TOP3A-215ENST00000583328 NSUN5P1Q3KNT7 163 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 C11orf88Q6PI97 169 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 COLCA1Q6ZS62 124 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 PGAP1Q75T13 922 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 CMTM4Q8IZR5 234 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 LYG1Q8N1E2 194 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 KLHDC1Q8N7A1 406 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 PLPP7Q8NBV4 271 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 OR4S1Q8NGB4 309 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 OR8D4Q8NGM9 314 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 TEX47Q8TBZ9 253 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 CFHR4Q92496 578 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 IFT27Q9BW83 186 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 SYT4Q9H2B2 425 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 PAPOLBQ9NRJ5 636 aaKnown RBP10.09□□□□□ -0.79
TOP3A-215ENST00000583328 C1orf123Q9NWV4 160 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 BAIAP2Q9UQB8 552 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 IER3IP1Q9Y5U9 82 aa10.09□□□□□ -0.79
TOP3A-215ENST00000583328 hCG_1807616A0A1W2PRN6 198 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 A6NLC8 198 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 H3BN98 237 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 RRP9O43818 475 aaKnown RBP10.08□□□□□ -0.8
TOP3A-215ENST00000583328 FCN3O75636 299 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 BAG2O95816 211 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 GRPP07492 148 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 OSMP13725 252 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 KIR2DS4P43632 304 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 DAPP51397 102 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 RCN1Q15293 331 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 KCNMB1Q16558 191 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 MEP1BQ16820 701 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 RSPO1Q2MKA7 263 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-215ENST00000583328 SLC36A3Q495N2 470 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 KDM4DQ6B0I6 523 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 CORO6Q6QEF8 472 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 METAP1DQ6UB28 335 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-215ENST00000583328 ZNF826PQ6ZT77 177 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 MRPL21Q7Z2W9 205 aaKnown RBP10.08□□□□□ -0.8
TOP3A-215ENST00000583328 ADCK1Q86TW2 530 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 FAM90A1Q86YD7 464 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 LY6G5BQ8NDX9 201 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 OR2T33Q8NG76 320 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 OR4C13Q8NGP0 309 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 OR2T6Q8NHC8 308 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 ERMAPQ96PL5 475 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-215ENST00000583328 TSSK6Q9BXA6 273 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 NUAK2Q9H093 628 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 KRT84Q9NSB2 600 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 KAAG1Q9UBP8 84 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 ENOPH1Q9UHY7 261 aa10.08□□□□□ -0.8
TOP3A-215ENST00000583328 IGHV3OR15-7A0A075B7D8 119 aa10.07□□□□□ -0.8
TOP3A-215ENST00000583328 MEIOCA2RUB1 952 aa10.07□□□□□ -0.8
TOP3A-215ENST00000583328 CD300LBA8K4G0 201 aa10.07□□□□□ -0.8
TOP3A-215ENST00000583328 H0YHG0 523 aa10.07□□□□□ -0.8
TOP3A-215ENST00000583328 BHLHE40O14503 412 aa10.07□□□□□ -0.8
TOP3A-215ENST00000583328 SOCS2O14508 198 aa10.07□□□□□ -0.8
TOP3A-215ENST00000583328 GMDSO60547 372 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms