RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MUC20Q8N307 709 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 BOLLQ8N9W6 283 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 PLPP7Q8NBV4 271 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 ZNF555Q8NEP9 628 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 OR51E1Q8TCB6 317 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 Q8TCH9 128 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 PIGCQ92535 297 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 PPP1R14AQ96A00 147 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 RNFT2Q96EX2 444 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 FAM71F1Q96KD3 344 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 MICU1Q9BPX6 476 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 PPP1R3EQ9H7J1 279 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 MOB1AQ9H8S9 216 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 PATZ1Q9HBE1 687 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 GPR84Q9NQS5 396 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 FAM118AQ9NWS6 357 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 C1orf123Q9NWV4 160 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 SMPD3Q9NY59 655 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 RNF7Q9UBF6 113 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 NUFIP1Q9UHK0 495 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 R4GMQ9 66 aa10.59□□□□□ -0.71
SMARCE1-218ENST00000582955 PPIAL4EA0A075B759 164 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 TRAV20A0A0B4J274 112 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 METTL15A6NJ78 407 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 ZNF850A8MQ14 1090 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 CEACAM18A8MTB9 384 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 PPIAL4DF5H284 164 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 MPZL2O60487 215 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 PTBP3O95758 552 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 TTRP02766 147 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 FAM157CP0CG43 387 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 PPIAL4FP0DN26 164 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 SRD5A1P18405 259 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 MAP2K3P46734 347 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 LCN2P80188 198 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 IL5RAQ01344 420 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 SLC25A30Q5SVS4 291 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 LPCAT4Q643R3 524 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 FAHD2BQ6P2I3 314 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 ZNF826PQ6ZT77 177 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 KCTD8Q6ZWB6 473 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 FAM220AQ7Z4H9 259 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 THAP5Q7Z6K1 395 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 ENTHD1Q8IYW4 607 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 C19orf18Q8NEA5 215 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 FAHD2AQ96GK7 314 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 RDH12Q96NR8 316 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 RTL8AQ9BWD3 113 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 ABCB9Q9NP78 766 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 OR52A1Q9UKL2 312 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 PPIAL4AQ9Y536 164 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 MPC1Q9Y5U8 109 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 SNX5Q9Y5X3 404 aa10.58□□□□□ -0.72
SMARCE1-218ENST00000582955 ZNF816-ZNF321PA0A0X1KG74 233 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 DAPL1A0PJW8 107 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 SRSF10O75494 262 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 FOXH1O75593 365 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 CST4P01036 141 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 RPS2P15880 293 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 PEX2P28328 305 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 CD80P33681 288 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 SRP14P37108 136 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 ACTC1P68032 377 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 ACTA1P68133 377 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 HOXA4Q00056 320 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 ZNF85Q03923 595 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 ZNF91Q05481 1191 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 TP53I3Q53FA7 332 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 LIPNQ5VXI9 398 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 WDR86Q86TI4 376 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 PRIMA1Q86XR5 153 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 ZDHHC23Q8IYP9 409 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 ELMOD2Q8IZ81 293 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 DEFB108BQ8NET1 73 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 SEMA6DQ8NFY4 1073 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 ITPKCQ96DU7 683 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 Q96MT0 163 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 HIST1H2AAQ96QV6 131 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 TMEM246Q9BRR3 403 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 TMEM165Q9HC07 324 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 G6PC2Q9NQR9 355 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 GNG8Q9UK08 70 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 SLC22A13Q9Y226 551 aa10.57□□□□□ -0.72
SMARCE1-218ENST00000582955 A0A0G2JMP0 313 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 A0A0X1KG70 313 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 F5H0A9 414 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 P2RY10O00398 339 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 SLC16A6O15403 523 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 MTRF1O75570 445 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 SULT1C4O75897 302 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 IFNA2P01563 188 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 IGLV3-1P01715 115 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 DBTP11182 482 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 ATP6V1B1P15313 513 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 FAHP16930 419 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 GABRB1P18505 474 aa10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 SEC61A1P61619 476 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-218ENST00000582955 CSNK2BP67870 215 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms