RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 DEFB108AA8MXU0 73 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 ZNF878C9JN71 531 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 ZFPL1O95159 310 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 ABHD16AO95870 558 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 RAB3BP20337 219 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 SELENOPP49908 381 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 PSMD7P51665 324 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 ZNF133P52736 654 aaPredicted RBP8.88□□□□□ -0.99
SS18-221ENST00000582448 PCBD1P61457 104 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 GRB2P62993 217 aaKnown RBP8.88□□□□□ -0.99
SS18-221ENST00000582448 PPP3R1P63098 170 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 MRPS34P82930 218 aaKnown RBP8.88□□□□□ -0.99
SS18-221ENST00000582448 BCL2L15Q5TBC7 163 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 ZIC4Q8N9L1 334 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 GJC3Q8NFK1 279 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 RNF133Q8WVZ7 376 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 ZNF845Q96IR2 970 aaPredicted RBP8.88□□□□□ -0.99
SS18-221ENST00000582448 C4orf45Q96LM5 186 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 ZFP3Q96NJ6 502 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 PDCD1LG2Q9BQ51 273 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 OPN3Q9H1Y3 402 aaPredicted RBP8.88□□□□□ -0.99
SS18-221ENST00000582448 MOB1AQ9H8S9 216 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 RNF122Q9H9V4 155 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 TCF7L1Q9HCS4 588 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 EMC7Q9NPA0 242 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 CMAHPQ9Y471 501 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 ZNF175Q9Y473 711 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 R4GMQ9 66 aa8.88□□□□□ -0.99
SS18-221ENST00000582448 IGKV1D-43A0A0B4J1Z2 117 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 TMEM269A0A1B0GVZ9 245 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 SLC22A20A6NK97 555 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 ZNF724A8MTY0 619 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 PRR32B1ATL7 298 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 TMEM127O75204 238 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 SC5DO75845 299 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 FARS2O95363 451 aaKnown RBP8.87□□□□□ -0.99
SS18-221ENST00000582448 TGM6O95932 706 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 YES1P07947 543 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 UCHL1P09936 223 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 UBCP0CG48 685 aaKnown RBP8.87□□□□□ -0.99
SS18-221ENST00000582448 CRYGSP22914 178 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 CD40LGP29965 261 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 CDAP32320 146 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 NANOS3P60323 173 aaKnown RBP8.87□□□□□ -0.99
SS18-221ENST00000582448 TNK1Q13470 666 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 TMEM177Q53S58 311 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 TMEM244Q5VVB8 128 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 VWA1Q6PCB0 445 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 ABHD12BQ7Z5M8 362 aaPredicted RBP8.87□□□□□ -0.99
SS18-221ENST00000582448 ZNF100Q8IYN0 542 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 RPS4Y2Q8TD47 263 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 ST7LQ8TDW4 575 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 ABHD3Q8WU67 409 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 TMEM171Q8WVE6 324 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 APH1AQ96BI3 265 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 STARD4Q96DR4 205 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 OR14A2Q96R54 314 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 AMELYQ99218 206 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 SLC30A2Q9BRI3 323 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 WACQ9BTA9 647 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 MRI1Q9BV20 369 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 SLCO5A1Q9H2Y9 848 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 SP140LQ9H930 580 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 AKIP1Q9NQ31 210 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 DHDHQ9UQ10 334 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 MED12Q93074 2177 aa8.87□□□□□ -0.99
SS18-221ENST00000582448 DOCK7Q96N67 2140 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 FBN1P35555 2871 aaKnown RBP8.86□□□□□ -0.99
SS18-221ENST00000582448 OR4C45A6NMZ5 311 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 ZNF587BE7ETH6 402 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 TNFSF13O75888 250 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 CLEC2LP0C7M8 214 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 ZNF20P17024 532 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 SRMP19623 302 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 TALDO1P37837 337 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 PPP5CP53041 499 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 ATP5J2P56134 94 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 SCRN3Q0VDG4 424 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 ECH1Q13011 328 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 INSL4Q14641 139 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 STK11Q15831 433 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 WDR38Q5JTN6 314 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 IDNKQ5T6J7 187 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 FAM27BQ5VT28 67 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 OTPQ5XKR4 325 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 CORO6Q6QEF8 472 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 ZNF474Q6S9Z5 364 aaPredicted RBP8.86□□□□□ -0.99
SS18-221ENST00000582448 UNQ9370/PRO34162Q6UXP9 181 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 FOXL2NBQ6ZUU3 175 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 CATSPERDQ86XM0 798 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 WDFY1Q8IWB7 410 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 OR13C5Q8NGS8 318 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 FNDC9Q8TBE3 224 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 HSD17B8Q92506 261 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 SPTSSAQ969W0 71 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 DCLRE1CQ96SD1 692 aaKnown RBP8.86□□□□□ -0.99
SS18-221ENST00000582448 BARHL1Q9BZE3 327 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 LINC00470Q9BZP3 86 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 CRLF2Q9HC73 371 aa8.86□□□□□ -0.99
SS18-221ENST00000582448 NOX4Q9NPH5 578 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms