RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FAM172BPA6NC97 362 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 IL5P05113 134 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 ANXA3P12429 323 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 VEGFCP49767 419 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 MECP2P51608 486 aaKnown RBP19.79■□□□□ 0.76
CCDC47-204ENST00000582252 ST3GAL2Q16842 350 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 KRTAP27-1Q3LI81 207 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 FAAP20Q6NZ36 180 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 Q6ZTK2 550 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 GABRG1Q8N1C3 465 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 CHST4Q8NCG5 386 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 SEMA6DQ8NFY4 1073 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 SSC4DQ8WTU2 575 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 URM1Q9BTM9 101 aaKnown RBP19.79■□□□□ 0.76
CCDC47-204ENST00000582252 UPB1Q9UBR1 384 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 ITGB1BP2Q9UKP3 347 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 RAB27BO00194 218 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 PSG4Q00888 419 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 MOGAT2Q3SYC2 334 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 ZNF260Q3ZCT1 412 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 ZNF584Q8IVC4 421 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 CST11Q9H112 138 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 CALHM2Q9HA72 323 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 ZNF222Q9UK12 451 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 ING4Q9UNL4 249 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 FLVCR2Q9UPI3 526 aa19.79■□□□□ 0.76
CCDC47-204ENST00000582252 TNRC6AQ8NDV7 1962 aaKnown RBP19.78■□□□□ 0.76
CCDC47-204ENST00000582252 MGAQ8IWI9 3026 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 MEIS3P1A6NDR6 274 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 LCATP04180 440 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 MELTFP08582 738 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 ANOS1P23352 680 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 GZMKP49863 264 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 TNFSF10P50591 281 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 UCNP55089 124 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 SKA3Q8IX90 412 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 TUSC5Q8IXB3 177 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 OR10R2Q8NGX6 335 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 AKR7LQ8NHP1 331 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 FNDC9Q8TBE3 224 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 SGK3Q96BR1 496 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 GINS4Q9BRT9 223 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 TMEM59Q9BXS4 323 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 WNT5BQ9H1J7 359 aa19.78■□□□□ 0.76
CCDC47-204ENST00000582252 TRGV5A0A0B4J1U4 118 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 IGKV1-9A0A0C4DH69 117 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 RAB3DO95716 219 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 CD3DP04234 171 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 FAHP16930 419 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 ALDH3B1P43353 468 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 OR3A4PP47883 348 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 RIPPLY1Q0D2K3 151 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 FAPQ12884 760 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 KISS1Q15726 138 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 SNAI3Q3KNW1 292 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 GLDNQ6ZMI3 551 aaPredicted RBP19.77■□□□□ 0.76
CCDC47-204ENST00000582252 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.77■□□□□ 0.76
CCDC47-204ENST00000582252 APH1AQ96BI3 265 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 REEP6Q96HR9 211 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 HYLS1Q96M11 299 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 SPACA5Q96QH8 159 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 SLC7A10Q9NS82 523 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 PTTG3PQ9NZH4 202 aa19.77■□□□□ 0.76
CCDC47-204ENST00000582252 DNAJC13O75165 2243 aa19.77■□□□□ 0.75
CCDC47-204ENST00000582252 C5orf63A6NC05 138 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 TMEM235A6NFC5 223 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 SNRPGP15A8MWD9 76 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 K7ENP7 123 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 CDC14BO60729 498 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 ITGB2P05107 769 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 SULT1A3P0DMM9 295 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 SULT1A4P0DMN0 295 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 MEF2DQ14814 521 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 CDK10Q15131 360 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 CDNFQ49AH0 187 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 INO80CQ6PI98 192 aaPredicted RBP19.76■□□□□ 0.75
CCDC47-204ENST00000582252 OR56B1Q8NGI3 324 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 S100A13Q99584 98 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 RANBP3Q9H6Z4 567 aaPredicted RBP19.76■□□□□ 0.75
CCDC47-204ENST00000582252 ZNF736B4DX44 427 aaPredicted RBP19.76■□□□□ 0.75
CCDC47-204ENST00000582252 CREBL2O60519 120 aaPredicted RBP19.76■□□□□ 0.75
CCDC47-204ENST00000582252 MPIG6BO95866 241 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 GSTP1P09211 210 aaKnown RBP19.76■□□□□ 0.75
CCDC47-204ENST00000582252 CPN1P15169 458 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 CNN3Q15417 329 aaKnown RBP19.76■□□□□ 0.75
CCDC47-204ENST00000582252 SFRP5Q5T4F7 317 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 OR11H7Q8NGC8 314 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 OR8S1Q8NH09 359 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 SPSB1Q96BD6 273 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 LPAR5Q9H1C0 372 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 BEX1Q9HBH7 125 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 ZNF224Q9NZL3 707 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 SCP2D1Q9UJQ7 156 aa19.76■□□□□ 0.75
CCDC47-204ENST00000582252 XRCC2O43543 280 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 MMP7P09237 267 aaPredicted RBP19.75■□□□□ 0.75
CCDC47-204ENST00000582252 PTGFRP43088 359 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 TMPRSS3P57727 454 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 ARF1P84077 181 aaKnown RBP19.75■□□□□ 0.75
CCDC47-204ENST00000582252 TNK1Q13470 666 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 TRAPPC6BQ86SZ2 158 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms