RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 COPS3Q9UNS2 423 aa16.28■□□□□ 0.2
SREBF1-220ENST00000581707 TRAV38-1A0A0B4J264 116 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 TMEM269A0A1B0GVZ9 245 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 ANXA2P2A6NMY6 339 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 C3orf80F5H4A9 247 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 ZNF254O75437 659 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 RGS9O75916 674 aaPredicted RBP16.27■□□□□ 0.2
SREBF1-220ENST00000581707 VENTXO95231 258 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 ACKR3P25106 362 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 DCTDP32321 178 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 CD80P33681 288 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 POLR2IP36954 125 aaKnown RBP16.27■□□□□ 0.2
SREBF1-220ENST00000581707 PSMB10P40306 273 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 ACTR3P61158 418 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 IL5RAQ01344 420 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 PAX2Q02962 417 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 PAX8Q06710 450 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 BTNL3Q6UXE8 466 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 WDR86Q86TI4 376 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 GID4Q8IVV7 300 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 C11orf53Q8IXP5 236 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 RAB40AQ8WXH6 277 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 OR8B4Q96RC9 309 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 MICU1Q9BPX6 476 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 OSBPL10Q9BXB5 764 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 FAM206AQ9NX38 181 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 MPC1Q9Y5U8 109 aa16.27■□□□□ 0.2
SREBF1-220ENST00000581707 OOEPA6NGQ2 149 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 PRR32B1ATL7 298 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 CST4P01036 141 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 LHBP01229 141 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 FPR2P25090 351 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 RIDAP52758 137 aaKnown RBP16.26■□□□□ 0.19
SREBF1-220ENST00000581707 KPNB1Q14974 876 aaKnown RBP16.26■□□□□ 0.19
SREBF1-220ENST00000581707 ARMCX4Q5H9R4 360 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 WDR25Q64LD2 544 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-220ENST00000581707 ZNF841Q6ZN19 808 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 USP43Q70EL4 1123 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 SLC35F2Q8IXU6 374 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 GALNT4Q8N4A0 578 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 GCSAMQ8N6F7 178 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 OR1M1Q8NGA1 313 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 ITPKCQ96DU7 683 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 MNTQ99583 582 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 RBM4BQ9BQ04 359 aaKnown RBP16.26■□□□□ 0.19
SREBF1-220ENST00000581707 GABARAPL3Q9BY60 117 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 TTTY10Q9BZA0 68 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 RIBC2Q9H4K1 309 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 RNPEPL1Q9HAU8 725 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 ADGRL4Q9HBW9 690 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 ABCB9Q9NP78 766 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 HAO2Q9NYQ3 351 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 IKZF2Q9UKS7 526 aa16.26■□□□□ 0.19
SREBF1-220ENST00000581707 IGHV2-70DA0A0C4DH43 119 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 A0A0U1RQV5 110 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 ZNF850A8MQ14 1090 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 PHYHO14832 338 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 NDUFA2O43678 99 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 PRDX4Q13162 271 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 ZNF829Q3KNS6 432 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-220ENST00000581707 ZNF322Q6U7Q0 402 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-220ENST00000581707 BPIFB2Q8N4F0 458 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 SEMA6DQ8NFY4 1073 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 FAM81AQ8TBF8 368 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 LRRC29Q8WV35 223 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 PIGCQ92535 297 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 SLC6A7Q99884 636 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 PKP2Q99959 881 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 RTL8AQ9BWD3 113 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 SUCNR1Q9BXA5 334 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 PBOV1Q9GZY1 135 aa16.25■□□□□ 0.19
SREBF1-220ENST00000581707 KIR2DS1A0A191URI9 304 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 TNFRSF13BO14836 293 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-220ENST00000581707 ADAM20O43506 726 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 GYPAP02724 150 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 MAP2K3P46734 347 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 NPY4RP50391 375 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 CXCR4P61073 352 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 CSNK2BP67870 215 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 ZFP1Q6P2D0 407 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 WDR82Q6UXN9 313 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 FAM90A1Q86YD7 464 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 C22orf15Q8WYQ4 148 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 OR5P3Q8WZ94 311 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 ITFG2Q969R8 447 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 DACT3Q96B18 629 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-220ENST00000581707 APOL4Q9BPW4 351 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 NUDT16L1Q9BRJ7 211 aaKnown RBP16.24■□□□□ 0.19
SREBF1-220ENST00000581707 TLNRD1Q9H1K6 362 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 CLN6Q9NWW5 311 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 ERVK-18Q9QC07 812 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 WARS2Q9UGM6 360 aaKnown RBP16.24■□□□□ 0.19
SREBF1-220ENST00000581707 NUP50Q9UKX7 468 aa16.24■□□□□ 0.19
SREBF1-220ENST00000581707 IGHV3OR15-7A0A075B7D8 119 aa16.23■□□□□ 0.19
SREBF1-220ENST00000581707 ZNF670-ZNF695F2Z2N8 137 aa16.23■□□□□ 0.19
SREBF1-220ENST00000581707 H3BNX3 289 aa16.23■□□□□ 0.19
SREBF1-220ENST00000581707 EGR1P18146 543 aa16.23■□□□□ 0.19
SREBF1-220ENST00000581707 HILS1P60008 231 aa16.23■□□□□ 0.19
SREBF1-220ENST00000581707 POU4F2Q12837 409 aa16.23■□□□□ 0.19
SREBF1-220ENST00000581707 KLF17Q5JT82 389 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms