RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TMEM267Q0VDI3 215 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 ZNF816Q0VGE8 651 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 MLF2Q15773 248 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 ARSGQ96EG1 525 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 PMCHP20382 165 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 PNLIPRP2P54317 469 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 SLC16A12Q6ZSM3 486 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 ZNF687Q8N1G0 1237 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 OTOSQ8NHW6 89 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 ELSPBP1Q96BH3 223 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 PHYHIPLQ96FC7 376 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 PLPP2O43688 288 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 PRR27Q6MZM9 219 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 CCDC74AQ96AQ1 378 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 ING1Q9UK53 422 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 ZNF835Q9Y2P0 537 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 POMT1Q9Y6A1 747 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 NRG2O14511 850 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 RPS19BP1Q86WX3 136 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 UBAC2Q8NBM4 344 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 EDEM2Q9BV94 578 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 PCMT1P22061 227 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 CCL11P51671 97 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 SLC25A1P53007 311 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 ETFDHQ16134 617 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 TMEM183BQ1AE95 376 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 KIRREL2Q6UWL6 708 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 ADGRG7Q96K78 797 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 NOL4LQ96MY1 436 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 IGHV3-15A0A0B4J1V0 119 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 TSPAN12O95859 305 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 ONECUT2O95948 504 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 NKAIN1Q4KMZ8 207 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 MRM1Q6IN84 353 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 ZADH2Q8N4Q0 377 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 SIRT5Q9NXA8 310 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
CSNK1D-217ENST00000581241 RPS16P62249 146 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 OR8B4Q96RC9 309 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 A0A1B0GTL3 188 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 FZD6O60353 706 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 ZNF66Q6ZN08 573 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 MUC20Q8N307 709 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 CLDN23Q96B33 292 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 NAT1P18440 290 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 MYPOPQ86VE0 399 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 VEGFBP49765 207 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 AGFG1P52594 562 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 SUMO3P55854 103 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 C9orf152Q5JTZ5 239 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 COMMD5Q9GZQ3 224 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 LSM2Q9Y333 95 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 MEOX2P50222 304 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 SCAND1P57086 179 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 GALMQ96C23 342 aa13.09□□□□□ -0.31
CSNK1D-217ENST00000581241 SSX1Q16384 188 aa13.08□□□□□ -0.31
CSNK1D-217ENST00000581241 FA2HQ7L5A8 372 aa13.08□□□□□ -0.31
CSNK1D-217ENST00000581241 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.31
CSNK1D-217ENST00000581241 CHST6Q9GZX3 395 aa13.08□□□□□ -0.31
CSNK1D-217ENST00000581241 SLC35B3Q9H1N7 401 aa13.08□□□□□ -0.31
CSNK1D-217ENST00000581241 OR5H15A6NDH6 313 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 OR5H1A6NKK0 313 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 SEMG1P04279 462 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 LBX1P52954 281 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 DGAT2L6Q6ZPD8 337 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 PMS2P1A4D2B8 440 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 HMSDA8MTL9 139 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 LEUTXA8MZ59 168 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 PIAS2O75928 621 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 CD200P41217 278 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 PGFP49763 221 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 RPEL1Q2QD12 228 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 SLC25A26Q70HW3 274 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 SIT1Q9Y3P8 196 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 A0A096LPE4 126 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 A0A1W2PPZ6 126 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 PCBP3P57721 371 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 IFI44Q8TCB0 444 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 TRIB1Q96RU8 372 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 PLRG1O43660 514 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 CEBPEQ15744 281 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 WBP2Q969T9 261 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 SCMH1Q96GD3 660 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 TIMD4Q96H15 378 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 TEX101Q9BY14 249 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 IL20Q9NYY1 176 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 TMED3Q9Y3Q3 217 aa13.08□□□□□ -0.32
CSNK1D-217ENST00000581241 MMP7P09237 267 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-217ENST00000581241 TMEM241Q24JQ0 296 aa13.07□□□□□ -0.32
CSNK1D-217ENST00000581241 VWA2Q5GFL6 755 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms