RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 IGKV1D-43A0A0B4J1Z2 117 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 TRIM64CA6NLI5 447 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 HLA-DQA2P01906 255 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 QDPRP09417 244 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 CSF1P09603 554 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 C21orf33P30042 268 aaPredicted RBP9□□□□□ -0.97
TOP3A-210ENST00000580713 CD80P33681 288 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 RBMXP38159 391 aaKnown RBP9□□□□□ -0.97
TOP3A-210ENST00000580713 SLC6A9P48067 706 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 PAX8Q06710 450 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 HNRNPA0Q13151 305 aaKnown RBP9□□□□□ -0.97
TOP3A-210ENST00000580713 TBC1D28Q2M2D7 210 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 C2orf68Q2NKX9 166 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 VAX1Q5SQQ9 334 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 C10orf128Q5T292 105 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 TMEM53Q6P2H8 277 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 SLC25A47Q6Q0C1 308 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 BTNL3Q6UXE8 466 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 BRD3OSQ6XYD6 125 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF627Q7L945 461 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 SHFQ7M4L6 423 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 REC114Q7Z4M0 266 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 SPARTQ8N0X7 666 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 SVOPQ8N4V2 548 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 OR1J2Q8NGS2 313 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 OR1J1Q8NGS3 322 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 NSMAFQ92636 917 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 DMRTB1Q96MA1 342 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 CHIAQ9BZP6 476 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 ADGRL4Q9HBW9 690 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 VCX3AQ9NNX9 186 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 DIMT1Q9UNQ2 313 aaKnown RBP9□□□□□ -0.97
TOP3A-210ENST00000580713 COMMD3-BMI1R4GMX3 469 aa9□□□□□ -0.97
TOP3A-210ENST00000580713 A0A1W2PPL8 197 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 TVP23AA6NH52 213 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 J3QRE1 110 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 SELENOFO60613 162 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 PLATP00750 562 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 PTHP01270 115 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 IGHV3-13P01766 116 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 IGHV2-70P01814 119 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 IGHA1P01876 353 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 MYL12AP19105 171 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 NAA10P41227 235 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF84P51523 738 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF133P52736 654 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-210ENST00000580713 ACTC1P68032 377 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 ACTA1P68133 377 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF718Q3SXZ3 478 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 RNLSQ5VYX0 342 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 LRFN4Q6PJG9 635 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 LYPD4Q6UWN0 246 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 SLC16A9Q7RTY1 509 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 ERI1Q8IV48 349 aaKnown RBP8.99□□□□□ -0.97
TOP3A-210ENST00000580713 GLB1L2Q8IW92 636 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 SLC35F2Q8IXU6 374 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 OR10H4Q8NGA5 316 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 OR10S1Q8NGN2 331 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 INTS14Q96SY0 518 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 SH3GL3Q99963 347 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 CDCA4Q9BXL8 241 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 C1orf198Q9H425 327 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 CHCHD3Q9NX63 227 aaKnown RBP8.99□□□□□ -0.97
TOP3A-210ENST00000580713 DCAF16Q9NXF7 216 aa8.99□□□□□ -0.97
TOP3A-210ENST00000580713 EXOSC1Q9Y3B2 195 aaKnown RBP8.99□□□□□ -0.97
TOP3A-210ENST00000580713 IQCMA0A1B0GVH7 501 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 DAPL1A0PJW8 107 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 C12orf71A8MTZ7 269 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 A8MXK9 166 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 DHHO43323 396 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 CLPXO76031 633 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 FARS2O95363 451 aaKnown RBP8.98□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF823P16415 610 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 CCNOP22674 350 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 LAP3P28838 519 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 GUCA1AP43080 201 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-210ENST00000580713 MAP2K4P45985 399 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 LOXL3P58215 753 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 HSF2Q03933 536 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 EMX1Q04741 257 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-210ENST00000580713 PLP2Q04941 152 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 BLMHQ13867 455 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 IRF3Q14653 427 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 TBCEQ15813 527 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-210ENST00000580713 NEDD8Q15843 81 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 SPATA46Q5T0L3 261 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 LRRN1Q6UXK5 716 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 KCTD8Q6ZWB6 473 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-210ENST00000580713 TIGD4Q8IY51 512 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 SLC22A24Q8N4F4 322 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 ACBD7Q8N6N7 88 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 SLC26A10Q8NG04 563 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 OR6N2Q8NGY6 317 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 LINC01006Q8NI28 216 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 UPRTQ96BW1 309 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 TBX5Q99593 518 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 JAM3Q9BX67 310 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 NOX4Q9NPH5 578 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 INPP5EQ9NRR6 644 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms