RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ZMAT4Q9H898 229 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 RNPEPL1Q9HAU8 725 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 C19orf12Q9NSK7 152 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 SNTG1Q9NSN8 517 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 PNPOQ9NVS9 261 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 SLAMF8Q9P0V8 285 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 ZNF391Q9UJN7 358 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 PITPNC1Q9UKF7 332 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 ZNF256Q9Y2P7 627 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 RAP2CQ9Y3L5 183 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 LHFPL6Q9Y693 200 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 KMT2AQ03164 3969 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 A6NIZ1 184 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 SH2D7A6NKC9 451 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 FAM90A22PA8MWA6 464 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 J3KRW8 73 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 TYROBPO43914 113 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 SERPINB7O75635 380 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 AMY1AP04745 511 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 AMY2AP04746 511 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 LPLP06858 475 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 NDUFB7P17568 137 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 CD247P20963 164 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 CASQ1P31415 396 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 DYNLT3P51808 116 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 LGALS4P56470 323 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 CAV3P56539 151 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 RAP1BP61224 184 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 RAP1AP62834 184 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 MXRA7P84157 204 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 ZNF92Q03936 586 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 SSX2Q16385 188 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 KCNMB1Q16558 191 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 MESTQ5EB52 335 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 CORO6Q6QEF8 472 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 OR2W3Q7Z3T1 314 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 OR5K1Q8NHB7 308 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 ANGPTL6Q8NI99 470 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 GATAD1Q8WUU5 269 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 TRIM63Q969Q1 353 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 RAX2Q96IS3 184 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 HSH2DQ96JZ2 352 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 HDHD2Q9H0R4 259 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 TMEM38AQ9H6F2 299 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 WDR55Q9H6Y2 383 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 PPP1R3EQ9H7J1 279 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 RMND5AQ9H871 391 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 ABCB10Q9NRK6 738 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 HAO2Q9NYQ3 351 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 MRPL15Q9P015 296 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 HAO1Q9UJM8 370 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 RPS6KA6Q9UK32 745 aa6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 COA3Q9Y2R0 106 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 NOP16Q9Y3C1 178 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-217ENST00000580654 TRBV5-3A0A0A0MS03 114 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 ODF3BA8MYP8 253 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 F5H5K5 113 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 M0QX08 132 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 SIGLEC5O15389 551 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 SASH3O75995 380 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 LCATP04180 440 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 RPLP1P05386 114 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 ACAA1P09110 424 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 MYF6P23409 242 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 POU1F1P28069 291 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 RBM34P42696 430 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 POLR2JP52435 117 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 GMFBP60983 142 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 CKAP4Q07065 602 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 SELPLGQ14242 412 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 MEP1BQ16820 701 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 SNAI3Q3KNW1 292 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 LRIF1Q5T3J3 769 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 C9orf66Q5T8R8 295 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 CFAP77Q6ZQR2 320 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 MRPL21Q7Z2W9 205 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 MAVSQ7Z434 540 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 ZNF329Q86UD4 541 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 GLB1L2Q8IW92 636 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 MICU2Q8IYU8 434 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 FAM185AQ8N0U4 392 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 OSR2Q8N2R0 312 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 OR1M1Q8NGA1 313 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 OR2AE1Q8NHA4 323 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 TMEM239Q8WW34 195 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 MALSU1Q96EH3 234 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 Q96M85 177 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 RAB3IPQ96QF0 476 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 DNTTIP1Q9H147 329 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 HEXA-AS1Q9H8Q6 139 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 PNRC2Q9NPJ4 139 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 VNN3Q9NY84 501 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 VAPAQ9P0L0 249 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 ADAM18Q9Y3Q7 739 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 GMEB1Q9Y692 573 aa6.06□□□□□ -1.44
SMARCE1-217ENST00000580654 TRAV27A0A087WT01 109 aa6.05□□□□□ -1.44
SMARCE1-217ENST00000580654 PRSS37A4D1T9 235 aa6.05□□□□□ -1.44
SMARCE1-217ENST00000580654 TRIM64CA6NLI5 447 aa6.05□□□□□ -1.44
SMARCE1-217ENST00000580654 BHLHE40O14503 412 aa6.05□□□□□ -1.44
SMARCE1-217ENST00000580654 CDIPTO14735 213 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms