RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 SFRP4Q6FHJ7 346 aaPredicted RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 STEAP1BQ6NZ63 245 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 TMEM53Q6P2H8 277 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 ZNF782Q6ZMW2 699 aaPredicted RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 P4HA3Q7Z4N8 544 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 DPPA2Q7Z7J5 298 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 TRAPPC6BQ86SZ2 158 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 NOXA1Q86UR1 476 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 ANGPTL5Q86XS5 388 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 ZNF584Q8IVC4 421 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 PAQR4Q8N4S7 273 aaPredicted RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 TMEM229BQ8NBD8 167 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 CHST4Q8NCG5 386 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 OR56B1Q8NGI3 324 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 OR5D18Q8NGL1 313 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 OR10R2Q8NGX6 335 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 FGFBP3Q8TAT2 258 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 NPRL2Q8WTW4 380 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 TNFAIP8L1Q8WVP5 186 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 NANOS1Q8WY41 292 aaKnown RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 PIGTQ969N2 578 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 SGK3Q96BR1 496 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 CMBLQ96DG6 245 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 SEH1LQ96EE3 360 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 ZNF486Q96H40 463 aaPredicted RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 RNF170Q96K19 258 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 FYTTD1Q96QD9 318 aaKnown RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 S100A13Q99584 98 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 GINS4Q9BRT9 223 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 URM1Q9BTM9 101 aaKnown RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 TRAF4Q9BUZ4 470 aaPredicted RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 LPAR5Q9H1C0 372 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 OR10A4Q9H209 315 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 IFT46Q9NQC8 304 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 GPR173Q9NS66 373 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 DLL3Q9NYJ7 618 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 NKIRAS2Q9NYR9 191 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 PAIP2BQ9ULR5 123 aaKnown RBP5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 CACNA1CQ13936 2221 aa5.5□□□□□ -1.53
PPP4R1-217ENST00000580583 MUC6Q6W4X9 2439 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 MYO15AQ9UKN7 3530 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 A0A096LPE4 126 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 ZNF816-ZNF321PA0A0X1KG74 233 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 A0A1W2PPZ6 126 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 UBE2QL1A1L167 161 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 ZNF736B4DX44 427 aaPredicted RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 MFNGO00587 321 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 AQP7O14520 342 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 TM4SF5O14894 197 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 CREBL2O60519 120 aaPredicted RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 RAB3DO95716 219 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 HLA-HP01893 362 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 C1QBP02746 253 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 CD74P04233 296 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 CD3DP04234 171 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 AMY2AP04746 511 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 IL5P05113 134 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 SULT1A3P0DMM9 295 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 SULT1A4P0DMN0 295 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 NAT2P11245 290 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 EDN3P14138 238 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 HIST1H1DP16402 221 aaKnown RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 MGMTP16455 207 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 TBPP20226 339 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 SDHBP21912 280 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 CPT2P23786 658 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 ACKR3P25106 362 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 PTGFRP43088 359 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 OR3A2P47893 321 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 MECP2P51608 486 aaKnown RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 GNG2P59768 71 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 RPS27AP62979 156 aaKnown RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 PLP2Q04941 152 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 FAPQ12884 760 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 UBE2V2Q15819 145 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 ST3GAL2Q16842 350 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 ZNF260Q3ZCT1 412 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 SLC22A6Q4U2R8 563 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 ACTBL2Q562R1 376 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 RNASE10Q5GAN6 216 aaKnown RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 CLVS2Q5SYC1 327 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 FBXW9Q5XUX1 488 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 TMEM42Q69YG0 159 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 NUFIP2Q7Z417 695 aaKnown RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 RNF144BQ7Z419 303 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 FJX1Q86VR8 437 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 TMEM104Q8NE00 496 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 STEAP2Q8NFT2 490 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 OR4D10Q8NGI6 311 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 OR1K1Q8NGR3 316 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 NUDCD2Q8WVJ2 157 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 SPSB4Q96A44 273 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 SARAFQ96BY9 339 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 RAB3CQ96E17 227 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 GMPPAQ96IJ6 420 aaPredicted RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 NICN1Q9BSH3 213 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 C1QTNF5Q9BXJ0 243 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 TP63Q9H3D4 680 aaPredicted RBP5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 OPA3Q9H6K4 179 aa5.49□□□□□ -1.53
PPP4R1-217ENST00000580583 C12orf49Q9H741 205 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms