RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 NRASP01111 189 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 RPL5P46777 297 aaKnown RBP12.21□□□□□ -0.45
SKA2-205ENST00000580541 PPOXP50336 477 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 OR8G1Q15617 311 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 ACSM3Q53FZ2 586 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 LRP11Q86VZ4 500 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 OR5AS1Q8N127 324 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 BHLHE23Q8NDY6 225 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 OR8S1Q8NH09 359 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 PIGCQ92535 297 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 FGGYQ96C11 551 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 MICU1Q9BPX6 476 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 TRAF4Q9BUZ4 470 aaPredicted RBP12.21□□□□□ -0.45
SKA2-205ENST00000580541 PAPOLGQ9BWT3 736 aaKnown RBP12.21□□□□□ -0.45
SKA2-205ENST00000580541 EGLN1Q9GZT9 426 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 C14orf119Q9NWQ9 140 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 NDUFB11Q9NX14 153 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 SLC7A11Q9UPY5 501 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 GSTK1Q9Y2Q3 226 aa12.21□□□□□ -0.45
SKA2-205ENST00000580541 C17orf100A8MU93 164 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 MAGEB3O15480 346 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 ARL6IP5O75915 188 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 RGS9O75916 674 aaPredicted RBP12.2□□□□□ -0.46
SKA2-205ENST00000580541 ALX3O95076 343 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 SMIM18P0DKX4 95 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 MMP15P51511 669 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 MST1LQ2TV78 715 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 UTS2BQ765I0 119 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 GPR141Q7Z602 305 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 ZDHHC23Q8IYP9 409 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 PARP16Q8N5Y8 322 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 CPNE2Q96FN4 548 aaPredicted RBP12.2□□□□□ -0.46
SKA2-205ENST00000580541 TRMT61AQ96FX7 289 aaKnown RBP12.2□□□□□ -0.46
SKA2-205ENST00000580541 CCL19Q99731 98 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 SLITRK2Q9H156 845 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 DECR2Q9NUI1 292 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 SSR3Q9UNL2 185 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 RHBDD3Q9Y3P4 386 aa12.2□□□□□ -0.46
SKA2-205ENST00000580541 TRBV5-5A0A0J9YX44 114 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 A0A1W2PPR1 153 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 ANKRD61A6NGH8 418 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 TPD52L2O43399 206 aaKnown RBP12.19□□□□□ -0.46
SKA2-205ENST00000580541 SOD3P08294 240 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 ADH4P08319 380 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 CD36P16671 472 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 FAHP16930 419 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 TNFRSF1AP19438 455 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 PRKACBP22694 351 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 CA6P23280 308 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 ACKR3P25106 362 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 ALDH3B1P43353 468 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 RANBP1P43487 201 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 SOX2P48431 317 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 SRP9P49458 86 aaKnown RBP12.19□□□□□ -0.46
SKA2-205ENST00000580541 GP2P55259 537 aaKnown RBP12.19□□□□□ -0.46
SKA2-205ENST00000580541 PPP3R1P63098 170 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 CNN3Q15417 329 aaKnown RBP12.19□□□□□ -0.46
SKA2-205ENST00000580541 MSMPQ1L6U9 139 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 GDPGP1Q6ZNW5 385 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 MOB3CQ70IA8 216 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 CEACAM19Q7Z692 300 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 CELF2-AS1Q8N7Q2 184 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 OR2Z1Q8NG97 314 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 OR5A2Q8NGI9 324 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 NEU4Q8WWR8 484 aaPredicted RBP12.19□□□□□ -0.46
SKA2-205ENST00000580541 TMEM203Q969S6 136 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 VRK1Q99986 396 aaPredicted RBP12.19□□□□□ -0.46
SKA2-205ENST00000580541 RTL8AQ9BWD3 113 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 ZCCHC4Q9H5U6 513 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 MSL2Q9HCI7 577 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 STUB1Q9UNE7 303 aa12.19□□□□□ -0.46
SKA2-205ENST00000580541 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 A0A1B0GWJ7 208 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 TRDV1A0A1B0GX56 115 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 MEGF11A6BM72 1044 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 ZNF850A8MQ14 1090 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 H3BSH0 61 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 SPRY3O43610 288 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 CD8AP01732 235 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 NAT2P11245 290 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 RAB3AP20336 220 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 ANOS1P23352 680 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 DNASE1P24855 282 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 TGFBR2P37173 567 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 RPS11P62280 158 aaKnown RBP eCLIP12.18□□□□□ -0.46
SKA2-205ENST00000580541 PRDX4Q13162 271 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 TNK1Q13470 666 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 SSX1Q16384 188 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 CEACAM21Q3KPI0 293 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 ALKBH6Q3KRA9 238 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 PLCXD3Q63HM9 321 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 TMEM42Q69YG0 159 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 C11orf71Q6IPW1 123 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 UNQ9370/PRO34162Q6UXP9 181 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 OR51A4Q8NGJ6 313 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 SPSB1Q96BD6 273 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 ELMOD3Q96FG2 381 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 OR14A2Q96R54 314 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 SOX7Q9BT81 388 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms