RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
TRAF4-214ENST00000580073 SMPD3Q9NY59 655 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-214ENST00000580073 DNAJC27Q9NZQ0 273 aa11.16□□□□□ -0.62
TRAF4-214ENST00000580073 ENOPH1Q9UHY7 261 aa11.16□□□□□ -0.62
TRAF4-214ENST00000580073 KCNG2Q9UJ96 466 aa11.16□□□□□ -0.62
TRAF4-214ENST00000580073 IGHV3OR16-10A0A075B7F0 116 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 LOC100130705A0A1B0GUX0 176 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 C5orf63A6NC05 138 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 M0QZ24 198 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 P2RY10O00398 339 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 PRODHO43272 600 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 NDUFA7O95182 113 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 PAICSP22234 425 aaKnown RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 CD200P41217 278 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 NAA10P41227 235 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 ENTPD1P49961 510 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 ADARB1P78563 741 aaKnown RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 MZT1Q08AG7 82 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 HLXQ14774 488 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 BRICD5Q6PL45 260 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 MEPCEQ7L2J0 689 aaKnown RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 DPY19L4Q7Z388 723 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 DCXRQ7Z4W1 244 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 NAA40Q86UY6 237 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 ERI1Q8IV48 349 aaKnown RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 ENTHD1Q8IYW4 607 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 PACRGLQ8N7B6 248 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 PNLDC1Q8NA58 520 aaKnown RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 OR2AJ1Q8NGZ0 328 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 DACT3Q96B18 629 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-214ENST00000580073 TECTBQ96PL2 329 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 INTS14Q96SY0 518 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 ATF6BQ99941 703 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 ORC6Q9Y5N6 252 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 GMPPBQ9Y5P6 360 aa11.15□□□□□ -0.62
TRAF4-214ENST00000580073 F5H5P2 479 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 MLNRO43193 412 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 NDUFA2O43678 99 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 ENTPD6O75354 484 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 ATP6V1G2O95670 118 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 MRPL3P09001 348 aaKnown RBP11.14□□□□□ -0.63
TRAF4-214ENST00000580073 SPARCP09486 303 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 ZNF823P16415 610 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 FGF12P61328 243 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 SNRPGP62308 76 aaKnown RBP11.14□□□□□ -0.63
TRAF4-214ENST00000580073 RIPK1Q13546 671 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 C11orf91Q3C1V1 193 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 SLC35D3Q5M8T2 416 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 METTL11BQ5VVY1 283 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 NXNL2Q5VZ03 156 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 WDR25Q64LD2 544 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-214ENST00000580073 OLFML2AQ68BL7 652 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 MRPL21Q7Z2W9 205 aaKnown RBP11.14□□□□□ -0.63
TRAF4-214ENST00000580073 OR8J1Q8NGP2 316 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 OR6N2Q8NGY6 317 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 RHOXF1Q8NHV9 184 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 APH1BQ8WW43 257 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 SPRYD4Q8WW59 207 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-214ENST00000580073 SSMEM1Q8WWF3 244 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 GATAD2BQ8WXI9 593 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 CDADC1Q9BWV3 514 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 MMP27Q9H306 513 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 FN3KRPQ9HA64 309 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 ERVK-18Q9QC07 812 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 COPS3Q9UNS2 423 aa11.14□□□□□ -0.63
TRAF4-214ENST00000580073 RRP15Q9Y3B9 282 aaKnown RBP11.14□□□□□ -0.63
TRAF4-214ENST00000580073 TRAV38-1A0A0B4J264 116 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 A0A0G2JK05 382 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 A0A1B0GWJ7 208 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 FAM181BA6NEQ2 426 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 H0YHG0 523 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 RRP9O43818 475 aaKnown RBP11.13□□□□□ -0.63
TRAF4-214ENST00000580073 APOL3O95236 402 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 GNAO1P09471 354 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 CDC42P60953 191 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 RPS7P62081 194 aaKnown RBP11.13□□□□□ -0.63
TRAF4-214ENST00000580073 OR8G1Q15617 311 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 DEFB112Q30KQ8 113 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 SLC25A30Q5SVS4 291 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 FIP1L1Q6UN15 594 aaKnown RBP11.13□□□□□ -0.63
TRAF4-214ENST00000580073 BRD3OSQ6XYD6 125 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 Q6YL49 198 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 PGAP1Q75T13 922 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 SHFQ7M4L6 423 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 PLPP7Q8NBV4 271 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 TBC1D15Q8TC07 691 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 SPTSSAQ969W0 71 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 RDH12Q96NR8 316 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 ABHD6Q9BV23 337 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 TEX12Q9BXU0 123 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 OPA3Q9H6K4 179 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 ADGRL4Q9HBW9 690 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 PKD1L1Q8TDX9 2849 aa11.13□□□□□ -0.63
TRAF4-214ENST00000580073 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-214ENST00000580073 CLPSL1A2RUU4 121 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 MAGEB4O15481 346 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-214ENST00000580073 WBP4O75554 376 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms