RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 INPP1P49441 399 aa8.81□□□□□ -1
SS18-207ENST00000577636 OR10A3P58181 314 aa8.81□□□□□ -1
SS18-207ENST00000577636 ZNF121P58317 390 aaPredicted RBP8.81□□□□□ -1
SS18-207ENST00000577636 ARF1P84077 181 aaKnown RBP8.81□□□□□ -1
SS18-207ENST00000577636 PITPNAQ00169 270 aa8.81□□□□□ -1
SS18-207ENST00000577636 TGFBR3Q03167 851 aa8.81□□□□□ -1
SS18-207ENST00000577636 PLP2Q04941 152 aa8.81□□□□□ -1
SS18-207ENST00000577636 FAPQ12884 760 aa8.81□□□□□ -1
SS18-207ENST00000577636 IL18Q14116 193 aa8.81□□□□□ -1
SS18-207ENST00000577636 PYDC2Q56P42 97 aa8.81□□□□□ -1
SS18-207ENST00000577636 FBXW9Q5XUX1 488 aa8.81□□□□□ -1
SS18-207ENST00000577636 TMEM53Q6P2H8 277 aa8.81□□□□□ -1
SS18-207ENST00000577636 DRAM2Q6UX65 266 aa8.81□□□□□ -1
SS18-207ENST00000577636 STAC2Q6ZMT1 411 aa8.81□□□□□ -1
SS18-207ENST00000577636 FAM57BQ71RH2 274 aa8.81□□□□□ -1
SS18-207ENST00000577636 DOK3Q7L591 496 aa8.81□□□□□ -1
SS18-207ENST00000577636 SERPINA12Q8IW75 414 aa8.81□□□□□ -1
SS18-207ENST00000577636 NKAIN3Q8N8D7 197 aa8.81□□□□□ -1
SS18-207ENST00000577636 GDPD1Q8N9F7 314 aa8.81□□□□□ -1
SS18-207ENST00000577636 MINDY2Q8NBR6 621 aa8.81□□□□□ -1
SS18-207ENST00000577636 OR52H1Q8NGJ2 320 aa8.81□□□□□ -1
SS18-207ENST00000577636 OR1F12Q8NHA8 337 aa8.81□□□□□ -1
SS18-207ENST00000577636 HTRA1Q92743 480 aa8.81□□□□□ -1
SS18-207ENST00000577636 FOXRED1Q96CU9 486 aaPredicted RBP8.81□□□□□ -1
SS18-207ENST00000577636 CMTM3Q96MX0 182 aa8.81□□□□□ -1
SS18-207ENST00000577636 OR10A2Q9H208 303 aa8.81□□□□□ -1
SS18-207ENST00000577636 NEK6Q9HC98 313 aa8.81□□□□□ -1
SS18-207ENST00000577636 ABCB10Q9NRK6 738 aa8.81□□□□□ -1
SS18-207ENST00000577636 SLC7A10Q9NS82 523 aa8.81□□□□□ -1
SS18-207ENST00000577636 ZNF701Q9NV72 531 aaPredicted RBP8.81□□□□□ -1
SS18-207ENST00000577636 TLN2Q9Y4G6 2542 aa8.81□□□□□ -1
SS18-207ENST00000577636 COL6A5A8TX70 2615 aa8.8□□□□□ -1
SS18-207ENST00000577636 H3BSH0 61 aa8.8□□□□□ -1
SS18-207ENST00000577636 M0R135 149 aa8.8□□□□□ -1
SS18-207ENST00000577636 HS3ST1O14792 307 aa8.8□□□□□ -1
SS18-207ENST00000577636 PIN1P1O15428 100 aa8.8□□□□□ -1
SS18-207ENST00000577636 MAGEB3O15480 346 aa8.8□□□□□ -1
SS18-207ENST00000577636 CGAP01215 116 aa8.8□□□□□ -1
SS18-207ENST00000577636 TTRP02766 147 aa8.8□□□□□ -1
SS18-207ENST00000577636 THBDP07204 575 aa8.8□□□□□ -1
SS18-207ENST00000577636 ACSM4P0C7M7 580 aa8.8□□□□□ -1
SS18-207ENST00000577636 CALCBP10092 127 aa8.8□□□□□ -1
SS18-207ENST00000577636 SLC2A2P11168 524 aaPredicted RBP8.8□□□□□ -1
SS18-207ENST00000577636 ZNF32P17041 273 aa8.8□□□□□ -1
SS18-207ENST00000577636 FSTP19883 344 aa8.8□□□□□ -1
SS18-207ENST00000577636 AGTR1P30556 359 aa8.8□□□□□ -1
SS18-207ENST00000577636 NTF4P34130 210 aa8.8□□□□□ -1
SS18-207ENST00000577636 CDKN1AP38936 164 aa8.8□□□□□ -1
SS18-207ENST00000577636 OR3A2P47893 321 aa8.8□□□□□ -1
SS18-207ENST00000577636 HTR5AP47898 357 aa8.8□□□□□ -1
SS18-207ENST00000577636 EVX1P49640 407 aa8.8□□□□□ -1
SS18-207ENST00000577636 SCAND1P57086 179 aa8.8□□□□□ -1
SS18-207ENST00000577636 RAB11BQ15907 218 aa8.8□□□□□ -1
SS18-207ENST00000577636 TRIM16LQ309B1 348 aa8.8□□□□□ -1
SS18-207ENST00000577636 GFOD2Q3B7J2 385 aa8.8□□□□□ -1
SS18-207ENST00000577636 CHRFAM7AQ494W8 412 aa8.8□□□□□ -1
SS18-207ENST00000577636 CCDC92Q53HC0 331 aaPredicted RBP8.8□□□□□ -1
SS18-207ENST00000577636 UBE2NLQ5JXB2 153 aa8.8□□□□□ -1
SS18-207ENST00000577636 CNIH2Q6PI25 160 aa8.8□□□□□ -1
SS18-207ENST00000577636 PGAP1Q75T13 922 aa8.8□□□□□ -1
SS18-207ENST00000577636 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
SS18-207ENST00000577636 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.8□□□□□ -1
SS18-207ENST00000577636 ZNF611Q8N823 705 aa8.8□□□□□ -1
SS18-207ENST00000577636 OR51A4Q8NGJ6 313 aa8.8□□□□□ -1
SS18-207ENST00000577636 OR10AC1Q8NH08 325 aa8.8□□□□□ -1
SS18-207ENST00000577636 OR51E1Q8TCB6 317 aa8.8□□□□□ -1
SS18-207ENST00000577636 C15orf40Q8WUR7 153 aa8.8□□□□□ -1
SS18-207ENST00000577636 PHF21AQ96BD5 680 aa8.8□□□□□ -1
SS18-207ENST00000577636 FBXO17Q96EF6 278 aa8.8□□□□□ -1
SS18-207ENST00000577636 ZNF837Q96EG3 531 aaPredicted RBP8.8□□□□□ -1
SS18-207ENST00000577636 ZNF799Q96GE5 643 aa8.8□□□□□ -1
SS18-207ENST00000577636 OR2H1Q9GZK4 316 aa8.8□□□□□ -1
SS18-207ENST00000577636 ZCCHC4Q9H5U6 513 aa8.8□□□□□ -1
SS18-207ENST00000577636 C12orf49Q9H741 205 aa8.8□□□□□ -1
SS18-207ENST00000577636 PNRC2Q9NPJ4 139 aaKnown RBP8.8□□□□□ -1
SS18-207ENST00000577636 ZNF275Q9NSD4 429 aaPredicted RBP8.8□□□□□ -1
SS18-207ENST00000577636 EXTL2Q9UBQ6 330 aa8.8□□□□□ -1
SS18-207ENST00000577636 ATPIF1Q9UII2 106 aa8.8□□□□□ -1
SS18-207ENST00000577636 ZNF391Q9UJN7 358 aa8.8□□□□□ -1
SS18-207ENST00000577636 ETV7Q9Y603 341 aa8.8□□□□□ -1
SS18-207ENST00000577636 A0A0G2JK05 382 aa8.79□□□□□ -1
SS18-207ENST00000577636 A0A0U1RQV5 110 aa8.79□□□□□ -1
SS18-207ENST00000577636 PHF1O43189 567 aaPredicted RBP8.79□□□□□ -1
SS18-207ENST00000577636 CD5LO43866 347 aa8.79□□□□□ -1
SS18-207ENST00000577636 UBL3O95164 117 aa8.79□□□□□ -1
SS18-207ENST00000577636 PAX1P15863 534 aa8.79□□□□□ -1
SS18-207ENST00000577636 RAB3AP20336 220 aa8.79□□□□□ -1
SS18-207ENST00000577636 MPGP29372 298 aa8.79□□□□□ -1
SS18-207ENST00000577636 SCN1BQ07699 218 aa8.79□□□□□ -1
SS18-207ENST00000577636 HES5Q5TA89 166 aa8.79□□□□□ -1
SS18-207ENST00000577636 TRIQKQ629K1 86 aa8.79□□□□□ -1
SS18-207ENST00000577636 ZNF774Q6NX45 483 aa8.79□□□□□ -1
SS18-207ENST00000577636 ANKRD16Q6P6B7 361 aa8.79□□□□□ -1
SS18-207ENST00000577636 ZNF627Q7L945 461 aa8.79□□□□□ -1
SS18-207ENST00000577636 NUFIP2Q7Z417 695 aaKnown RBP8.79□□□□□ -1
SS18-207ENST00000577636 LRRTM1Q86UE6 522 aa8.79□□□□□ -1
SS18-207ENST00000577636 SKA3Q8IX90 412 aa8.79□□□□□ -1
SS18-207ENST00000577636 CCDC36Q8IYA8 594 aa8.79□□□□□ -1
SS18-207ENST00000577636 C19orf18Q8NEA5 215 aa8.79□□□□□ -1
SS18-207ENST00000577636 OR8B12Q8NGG6 310 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms