RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 UNC93AQ86WB7 457 aa2.33□□□□□ -2.04
CDC27-219ENST00000576484 KRTAP13-1Q8IUC0 172 aa2.33□□□□□ -2.04
CDC27-219ENST00000576484 AHSPQ9NZD4 102 aa2.33□□□□□ -2.04
CDC27-219ENST00000576484 CAB39Q9Y376 341 aaPredicted RBP2.33□□□□□ -2.04
CDC27-219ENST00000576484 TRAV25A0A0B4J276 109 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 CCL15-CCL14A0A0B4J2E2 113 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 LRRIQ4A6NIV6 560 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 MFNGO00587 321 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 OR7C2O60412 319 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 CTNSO60931 367 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 PCK1P35558 622 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 RAD51Q06609 339 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 TFDP2Q14188 446 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 OR1Q1Q15612 314 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 CCL15Q16663 113 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 SPIN3Q5JUX0 258 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 TMEM236Q5W0B7 351 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 KDM4DQ6B0I6 523 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 RWDD4Q6NW29 188 aaKnown RBP2.32□□□□□ -2.04
CDC27-219ENST00000576484 Q6ZSR6 202 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 RAB43Q86YS6 212 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 KATNAL2Q8IYT4 538 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 LRRC75AQ8NAA5 344 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 ZNF680Q8NEM1 530 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 S100PBPQ96BU1 408 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 FAM19A4Q96LR4 140 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 OPALINQ96PE5 141 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 SHANK2-AS3Q9BTD1 123 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 EMC6Q9BV81 110 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 VPS37BQ9H9H4 285 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 MCUBQ9NWR8 336 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 ZNF391Q9UJN7 358 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 SHROOM3Q8TF72 1996 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 SEC16AO15027 2179 aa2.32□□□□□ -2.04
CDC27-219ENST00000576484 HIVEP2P31629 2446 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 IGKV2-24A0A0C4DH68 120 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 A0A1W2PRD5 423 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 PRAMEF26H0Y7S4 382 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 MANBAO00462 879 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 ZBTB5O15062 677 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 SIVA1O15304 175 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 XRCC2O43543 280 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 CTAG2O75638 210 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 FGF4P08620 206 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 TACSTD2P09758 323 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 ANXA8P13928 327 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 NELFEP18615 380 aaKnown RBP2.31□□□□□ -2.04
CDC27-219ENST00000576484 APLNRP35414 380 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 OR1G1P47890 313 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 AP1S2P56377 157 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 OR2B8PP59922 312 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 MEF2BQ02080 365 aaPredicted RBP2.31□□□□□ -2.04
CDC27-219ENST00000576484 IL18Q14116 193 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 ANXA8L1Q5VT79 327 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 OR2T5Q6IEZ7 315 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 OR2T29Q8NH02 315 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 ASZ1Q8WWH4 475 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 APH1AQ96BI3 265 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 SCGB3A2Q96PL1 93 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 AGMATQ9BSE5 352 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 C1orf50Q9BV19 199 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 DYRK4Q9NR20 520 aa2.31□□□□□ -2.04
CDC27-219ENST00000576484 CENPBD1B2RD01 187 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 P0C880 135 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 SFTPCP11686 197 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 KDSRQ06136 332 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 SP6Q3SY56 376 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 SLC25A29Q8N8R3 303 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 OR52K2Q8NGK3 314 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 ITFG1Q8TB96 612 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 CA5BP1Q8WTZ4 195 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 C9orf72Q96LT7 481 aa2.3□□□□□ -2.04
CDC27-219ENST00000576484 NAP1L5Q96NT1 182 aaPredicted RBP2.3□□□□□ -2.04
CDC27-219ENST00000576484 MTG1Q9BT17 334 aaPredicted RBP2.3□□□□□ -2.04
CDC27-219ENST00000576484 CARHSP1Q9Y2V2 147 aaKnown RBP2.3□□□□□ -2.04
CDC27-219ENST00000576484 KIR2DS1A0A191URI9 304 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 A0A1W2PNN7 141 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 GOLGA8TH3BQL2 631 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 PSPHP1O15172 72 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 MPDU1O75352 247 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 CBR3O75828 277 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 CATP04040 527 aaKnown RBP2.29□□□□□ -2.04
CDC27-219ENST00000576484 THRAP10827 490 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 CD82P27701 267 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 GBE1Q04446 702 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 BTN1A1Q13410 526 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 TAF9Q16594 264 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 MFSD14CQ5VZR4 134 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 CLEC2AQ6UVW9 174 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 SGPP2Q8IWX5 399 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 MICU2Q8IYU8 434 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 COMMD1Q8N668 190 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 RXFP2Q8WXD0 754 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 SEC22CQ9BRL7 303 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 SFXN3Q9BWM7 321 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 CD209Q9NNX6 404 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 PXMP2Q9NR77 195 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 FBXO8Q9NRD0 319 aa2.29□□□□□ -2.04
CDC27-219ENST00000576484 TREX1Q9NSU2 369 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms