RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 CDIPTO14735 213 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 EDF1O60869 148 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 TIPRLO75663 272 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 KRT34O76011 436 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 MPIG6BO95866 241 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 HLA-DQA2P01906 255 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 H1F0P07305 194 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 TROVE2P10155 538 aaKnown RBP eCLIP8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 PSKH1P11801 424 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 PAX6P26367 422 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 NAA10P41227 235 aaPredicted RBP8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 RPS27P42677 84 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 FAM3AP98173 230 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 KLF10Q13118 480 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 DGUOKQ16854 277 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 LIAT1Q6ZQX7 453 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 CYP4Z1Q86W10 505 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 LNX2Q8N448 690 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 OR5D13Q8NGL4 314 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 OR4K13Q8NH42 304 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 DYDC1Q8WWB3 177 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 H1FXQ92522 213 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 DUS3LQ96G46 650 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 MED30Q96HR3 178 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 HSH2DQ96JZ2 352 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 DDOQ99489 341 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 SIKE1Q9BRV8 207 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 NPFFR1Q9GZQ6 430 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 WDR13Q9H1Z4 485 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 PPP1R3EQ9H7J1 279 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 ZNF702PQ9H963 129 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 PLA2G2EQ9NZK7 142 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 NDUFAF4Q9P032 175 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 CAPN7Q9Y6W3 813 aa8.09□□□□□ -1.11
CALCOCO2-227ENST00000575560 XRCC2O43543 280 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 IDH3BO43837 385 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SERPINA1P01009 418 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 ACAA1P09110 424 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SLC2A1P11166 492 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 IGLL1P15814 213 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 ZNF823P16415 610 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 RHCEP18577 417 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SLC6A6P31641 620 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 CAV3P56539 151 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 MXRA7P84157 204 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 BLMHQ13867 455 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 HABP2Q14520 560 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 FGD3Q5JSP0 725 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SLC16A9Q7RTY1 509 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SLC15A3Q8IY34 581 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 CYB561A3Q8NBI2 242 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 PAPD5Q8NDF8 572 aaKnown RBP8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 ANGPTL6Q8NI99 470 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 ZNRF4Q8WWF5 429 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SGK3Q96BR1 496 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 C7orf34Q96L11 122 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 ATP6V1G3Q96LB4 118 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 DHRS1Q96LJ7 313 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 GAFA1Q96PS6 74 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 RAB3IPQ96QF0 476 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 KCNJ15Q99712 375 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 CITED2Q99967 270 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 WNT10AQ9GZT5 417 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 OR52D1Q9H346 318 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 FN3KQ9H479 309 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SAR1AQ9NR31 198 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SNTG1Q9NSN8 517 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 MRGBPQ9NV56 204 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 INTS9Q9NV88 658 aaKnown RBP8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 SLC25A10Q9UBX3 287 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 ZNF391Q9UJN7 358 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 AP3M1Q9Y2T2 418 aa8.08□□□□□ -1.12
CALCOCO2-227ENST00000575560 VGLL3A8MV65 326 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 SIGLEC5O15389 551 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 ANGPTL7O43827 346 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 TFF1P04155 84 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 GSK3BP49841 420 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 BMXP51813 675 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 PRKXP51817 358 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 LIPEQ05469 1076 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 KLHL12Q53G59 568 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 FAM76BQ5HYJ3 339 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 ZBTB37Q5TC79 503 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 CCBE1Q6UXH8 406 aaPredicted RBP8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 DCXRQ7Z4W1 244 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 ZDHHC21Q8IVQ6 265 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 C11orf42Q8N5U0 333 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 SDR9C7Q8NEX9 313 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 OR4C15Q8NGM1 316 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 OR10Z1Q8NGY1 313 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 FANK1Q8TC84 345 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 WWC2-AS2Q96NR7 200 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 CDCA4Q9BXL8 241 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 NSRP1Q9H0G5 558 aaKnown RBP8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 KRCC1Q9NPI7 259 aaPredicted RBP8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 RHBDD3Q9Y3P4 386 aa8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 FAM32AQ9Y421 112 aaKnown RBP8.07□□□□□ -1.12
CALCOCO2-227ENST00000575560 hCG_38984A0A1B0GV85 526 aa8.06□□□□□ -1.12
CALCOCO2-227ENST00000575560 A0A1W2PQ09 198 aa8.06□□□□□ -1.12
CALCOCO2-227ENST00000575560 TVP23AA6NH52 213 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms