RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ZNF726P1Q15940 193 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 PRSS8Q16651 343 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 PARP15Q460N3 678 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 FHL5Q5TD97 284 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 HECTD2Q5U5R9 776 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 CYB5R2Q6BCY4 276 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 SYCE2Q6PIF2 218 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 C12orf54Q6X4T0 127 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 RASSF6Q6ZTQ3 369 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 CATSPER3Q86XQ3 398 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 ARRDC1Q8N5I2 433 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 OR2M7Q8NG81 312 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 OR13G1Q8NGZ3 307 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 RDH5Q92781 318 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 YIPF5Q969M3 257 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 P2RX4Q99571 388 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 RARRES2Q99969 163 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 CMSS1Q9BQ75 279 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 C20orf144Q9BQM9 153 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 PITPNM3Q9BZ71 974 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 ADGRL4Q9HBW9 690 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 IL1RAPQ9NPH3 570 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 MIEF1Q9NQG6 463 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC7A10Q9NS82 523 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 TMEM181Q9P2C4 612 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 RAB22AQ9UL26 194 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 MMP17Q9ULZ9 603 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF518AQ6AHZ1 1483 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 LOC100131303A0A0U1RQF7 123 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 A0A1B0GWB2 263 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 C15orf61A6NNL5 157 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 MFNGO00587 321 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 GABRPO00591 440 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 SULT1C4O75897 302 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 ATG12O94817 140 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 NDUFB8O95169 186 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC2A10O95528 541 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 MT-CO2P00403 227 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 LALBAP00709 142 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 KLK3P07288 261 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 CD55P08174 381 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 OR13C7P0DN81 318 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 COX4I1P13073 169 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 CD99P14209 185 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 PAX1P15863 534 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 TCP1P17987 556 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 OGNP20774 298 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 MAKP20794 623 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 GABRR1P24046 479 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 PSMB9P28065 219 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 ERP29P30040 261 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC6A1P30531 599 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 FCGR2CP31995 323 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 OPRL1P41146 370 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 GSK3BP49841 420 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 PAX9P55771 341 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 BRWD1-AS2P59051 145 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 HIST1H3AP68431 136 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 H3F3AP84243 136 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 TAB1Q15750 504 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 ACSBG2Q5FVE4 666 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 SYT6Q5T7P8 510 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 FAM78BQ5VT40 261 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 OTPQ5XKR4 325 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 SUMO4Q6EEV6 95 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 C4orf22Q6V702 233 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 HIST2H3AQ71DI3 136 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 GLT6D1Q7Z4J2 308 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 GALNT10Q86SR1 603 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 RBM23Q86U06 439 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 COMMD7Q86VX2 200 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 NEXN-AS1Q8NBZ9 246 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 OR6T1Q8NGN1 323 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 OR13C6PQ8NH95 151 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNRF4Q8WWF5 429 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 FGF11Q92914 225 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 SCMH1Q96GD3 660 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 COL21A1Q96P44 957 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 RHNO1Q9BSD3 238 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 C2orf88Q9BSF0 95 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 MED18Q9BUE0 208 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 KRTAP4-5Q9BYR2 181 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 ACTR6Q9GZN1 396 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 CCDC90BQ9GZT6 254 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 OR51I1Q9H343 314 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 EXOSC3Q9NQT5 275 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 DOK5Q9P104 306 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 OR1A1Q9P1Q5 309 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 DKKL1Q9UK85 242 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 ANGPT4Q9Y264 503 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC35A3Q9Y2D2 325 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 PPP2R2CQ9Y2T4 447 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 SIGLEC9Q9Y336 463 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 RTL9Q8NET4 1388 aa4.14□□□□□ -1.75
TOPBP1-210ENST00000572787 PRORSD1PA6NEY8 169 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 IGLON5A6NGN9 336 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 CDX4O14627 284 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 MBTPS2O43462 519 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 SPRY3O43610 288 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF623O75123 536 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms