RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PDP1Q9P0J1 537 aaPredicted RBP14.96□□□□□ -0.01
CHD3-214ENST00000572579 PRPF19Q9UMS4 504 aaKnown RBP14.96□□□□□ -0.01
CHD3-214ENST00000572579 hCG_1807616A0A1W2PRN6 198 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 ARRDC5A6NEK1 342 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 FAM181BA6NEQ2 426 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 ANKRD30BLA7E2S9 258 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 H3BN98 237 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 KCNAB3O43448 404 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 NDUFA2O43678 99 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 TOX4O94842 621 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 POU1F1P28069 291 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 ARF6P62330 175 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 CDK5Q00535 292 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 PRB3Q04118 309 aaPredicted RBP14.95□□□□□ -0.02
CHD3-214ENST00000572579 KCNJ8Q15842 424 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 TIGD6Q17RP2 521 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 CD276Q5ZPR3 534 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 CCDC197Q8NCU1 140 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 TEX47Q8TBZ9 253 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 OTULINQ96BN8 352 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 ITPKCQ96DU7 683 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 CHIAQ9BZP6 476 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 TOR3AQ9H497 397 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 ZNF696Q9H7X3 374 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 RNPEPL1Q9HAU8 725 aa14.95□□□□□ -0.02
CHD3-214ENST00000572579 PRR32B1ATL7 298 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 P2RY10O00398 339 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 CDIPTO14735 213 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 LIPFP07098 398 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 MELTFP08582 738 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 SELLP14151 372 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 SLC2A5P22732 501 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 HSD11B1P28845 292 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 DLX1P56177 255 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 IL13RA1P78552 427 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 GFOD2Q3B7J2 385 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 WDR38Q5JTN6 314 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 GPR157Q5UAW9 335 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 TMEM236Q5W0B7 351 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 RHOUQ7L0Q8 258 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 CPOQ8IVL8 374 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 PIP4P2Q8N4L2 257 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 FAM216BQ8N7L0 139 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 LY6G5BQ8NDX9 201 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 OR8S1Q8NH09 359 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 OTOSQ8NHW6 89 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 WDR13Q9H1Z4 485 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 C1orf21Q9H246 121 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 C14orf119Q9NWQ9 140 aa14.94□□□□□ -0.02
CHD3-214ENST00000572579 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.93□□□□□ -0.02
CHD3-214ENST00000572579 BPIFB3P59826 476 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 SHFQ7M4L6 423 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 PDZD9Q8IXQ8 264 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 GALNT4Q8N4A0 578 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 OR5T2Q8NGG2 359 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 OR52H1Q8NGJ2 320 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 HPSE2Q8WWQ2 592 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 ZDHHC16Q969W1 377 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 OR10A2Q9H208 303 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 C1RLQ9NZP8 487 aa14.93□□□□□ -0.02
CHD3-214ENST00000572579 RPUSD1Q9UJJ7 312 aaKnown RBP14.93□□□□□ -0.02
CHD3-214ENST00000572579 IGHV1-69DA0A0B4J2H0 117 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 A0A0U1RQK1 487 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 AQP12BA6NM10 295 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 POM121CA8CG34 1229 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 ZNF850A8MQ14 1090 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 IGHV1-69P01742 117 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 H2BFMP0C1H6 154 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 OSMP13725 252 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 ALOX5APP20292 161 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 NAA10P41227 235 aaPredicted RBP14.92□□□□□ -0.02
CHD3-214ENST00000572579 TGM4P49221 684 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 KRTAP10-3P60369 221 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 GK3PQ14409 553 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 FAM76BQ5HYJ3 339 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 FIP1L1Q6UN15 594 aaKnown RBP14.92□□□□□ -0.02
CHD3-214ENST00000572579 AQP12AQ8IXF9 295 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 OR8B12Q8NGG6 310 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 THEM6Q8WUY1 208 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 OR5P3Q8WZ94 311 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 ST8SIA4Q92187 359 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 RPL3LQ92901 407 aaKnown RBP14.92□□□□□ -0.02
CHD3-214ENST00000572579 LHX4Q969G2 390 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 PGAM5Q96HS1 289 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 LRGUKQ96M69 825 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 PAPOLGQ9BWT3 736 aaKnown RBP14.92□□□□□ -0.02
CHD3-214ENST00000572579 CNTD2Q9H8S5 307 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 NOX4Q9NPH5 578 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 TRIM36Q9NQ86 728 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 MMP24Q9Y5R2 645 aa14.92□□□□□ -0.02
CHD3-214ENST00000572579 CCDC182A6NF36 153 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 PRR23D1E9PI22 279 aaPredicted RBP14.91□□□□□ -0.02
CHD3-214ENST00000572579 CST4P01036 141 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 LYNP07948 512 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 PRR23D2P0DMB1 279 aaPredicted RBP14.91□□□□□ -0.02
CHD3-214ENST00000572579 MUC1P15941 1255 aaPredicted RBP14.91□□□□□ -0.02
CHD3-214ENST00000572579 DCTDP32321 178 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 MZT1Q08AG7 82 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 PRDX4Q13162 271 aa14.91□□□□□ -0.02
CHD3-214ENST00000572579 DMRTC1Q5HYR2 192 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms