RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 ANXA2P2A6NMY6 339 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 LGALS8O00214 317 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 EI24O14681 340 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 TCF21O43680 179 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 ALPLP05186 524 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 ACKR3P25106 362 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 HTR1FP30939 366 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 CDC42P60953 191 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 GNB2P62879 340 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 HOXA4Q00056 320 aaPredicted RBP16.84■□□□□ 0.29
NUP88-204ENST00000572290 IL5RAQ01344 420 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 KCNJ8Q15842 424 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 LIPNQ5VXI9 398 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 ZNF826PQ6ZT77 177 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 OR1M1Q8NGA1 313 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 MICU1Q9BPX6 476 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 PBOV1Q9GZY1 135 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 PPP1R3EQ9H7J1 279 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 ABCB9Q9NP78 766 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 OPN4Q9UHM6 478 aa16.84■□□□□ 0.29
NUP88-204ENST00000572290 FBN1P35555 2871 aaKnown RBP16.84■□□□□ 0.29
NUP88-204ENST00000572290 A0A0U1RQV5 110 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 CST4P01036 141 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 ZNF12P17014 697 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 ADRA2CP18825 462 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 CD80P33681 288 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 PITPNBP48739 271 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 ALDH3A2P51648 485 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 SRSF2Q01130 221 aaKnown RBP16.83■□□□□ 0.28
NUP88-204ENST00000572290 POU4F2Q12837 409 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 PRDX4Q13162 271 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 SFRP4Q6FHJ7 346 aaPredicted RBP16.83■□□□□ 0.28
NUP88-204ENST00000572290 LYPD2Q6UXB3 125 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 WDR86Q86TI4 376 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 GALNT4Q8N4A0 578 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 NANPQ8TBE9 248 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 FAM81AQ8TBF8 368 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 PIGCQ92535 297 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 ITPKCQ96DU7 683 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 APOL4Q9BPW4 351 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 TRIM36Q9NQ86 728 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 INSIG2Q9Y5U4 225 aa16.83■□□□□ 0.28
NUP88-204ENST00000572290 DYSFO75923 2080 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 TRAV38-1A0A0B4J264 116 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 OOEPA6NGQ2 149 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 ZNF850A8MQ14 1090 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 C3orf80F5H4A9 247 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 EPHA1P21709 976 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 MAP2K3P46734 347 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 EGR3Q06889 387 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 ZNF154Q13106 437 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 COMMD2Q86X83 199 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 C11orf53Q8IXP5 236 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 CBR4Q8N4T8 237 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 GCSAMQ8N6F7 178 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 SPATA3Q8NHX4 192 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 TRUB1Q8WWH5 349 aaKnown RBP16.82■□□□□ 0.28
NUP88-204ENST00000572290 RFKQ969G6 155 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 ITFG2Q969R8 447 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 EME1Q96AY2 570 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 RTL8AQ9BWD3 113 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 RNPEPL1Q9HAU8 725 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 S100A14Q9HCY8 104 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 IMPAD1Q9NX62 359 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 NUFIP1Q9UHK0 495 aaKnown RBP16.82■□□□□ 0.28
NUP88-204ENST00000572290 AUP1Q9Y679 476 aa16.82■□□□□ 0.28
NUP88-204ENST00000572290 LOC110117498-PIK3R3F6TDL0 507 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 MAGEB4O15481 346 aaPredicted RBP16.81■□□□□ 0.28
NUP88-204ENST00000572290 ATP6V1B1P15313 513 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 PSMB10P40306 273 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 CSNK2BP67870 215 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 MFGE8Q08431 387 aaPredicted RBP16.81■□□□□ 0.28
NUP88-204ENST00000572290 TMED1Q13445 227 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 KRTAP24-1Q3LI83 254 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 ZIK1Q3SY52 487 aaPredicted RBP16.81■□□□□ 0.28
NUP88-204ENST00000572290 PHC2Q8IXK0 858 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 ZDHHC23Q8IYP9 409 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 OR51E1Q8TCB6 317 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 OR5P3Q8WZ94 311 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 PPP1R14AQ96A00 147 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 FAM71F1Q96KD3 344 aaPredicted RBP16.81■□□□□ 0.28
NUP88-204ENST00000572290 HIST1H2AAQ96QV6 131 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 TBX5Q99593 518 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 MRI1Q9BV20 369 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 MOB1AQ9H8S9 216 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 CLN8Q9UBY8 286 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 MRM2Q9UI43 246 aaKnown RBP16.81■□□□□ 0.28
NUP88-204ENST00000572290 GTF2A1LQ9UNN4 478 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 R4GMQ9 66 aa16.81■□□□□ 0.28
NUP88-204ENST00000572290 ZNF816-ZNF321PA0A0X1KG74 233 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 NDUFA2O43678 99 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 SRSF10O75494 262 aaKnown RBP16.8■□□□□ 0.28
NUP88-204ENST00000572290 APOL3O95236 402 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 LHBP01229 141 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 IGLV3-1P01715 115 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 OR2T7P0C7T2 308 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 EGR1P18146 543 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 ATP6V1E1P36543 226 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 WDR25Q64LD2 544 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms