RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NKX3-1Q99801 234 aaPredicted RBP16.16■□□□□ 0.18
CCDC40-206ENST00000572083 IFT27Q9BW83 186 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 FAM234AQ9H0X4 552 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 OPA3Q9H6K4 179 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 METTL8Q9H825 291 aaKnown RBP16.16■□□□□ 0.18
CCDC40-206ENST00000572083 KRCC1Q9NPI7 259 aaPredicted RBP16.16■□□□□ 0.18
CCDC40-206ENST00000572083 ZNF391Q9UJN7 358 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 CAPN7Q9Y6W3 813 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 MEGF11A6BM72 1044 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 TVP23AA6NH52 213 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 M0R1W7 72 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 CDIPTO14735 213 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 ARPC3O15145 178 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 DIRAS1O95057 198 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 PYCR1P32322 319 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 SF3A3Q12874 501 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC40-206ENST00000572083 HABP2Q14520 560 aaPredicted RBP16.15■□□□□ 0.18
CCDC40-206ENST00000572083 HCP5Q6MZN7 132 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 PGBD2Q6P3X8 592 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 OR9Q1Q8NGQ5 310 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 RCN3Q96D15 328 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 AJUBAQ96IF1 538 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 WDR13Q9H1Z4 485 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 RAB18Q9NP72 206 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 NDUFAF4Q9P032 175 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 SLC25A10Q9UBX3 287 aaPredicted RBP16.15■□□□□ 0.18
CCDC40-206ENST00000572083 KCNG2Q9UJ96 466 aa16.15■□□□□ 0.18
CCDC40-206ENST00000572083 NKX6-3A6NJ46 265 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 TBX1O43435 398 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 XRCC2O43543 280 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 ANGPTL7O43827 346 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 NAA10P41227 235 aaPredicted RBP16.14■□□□□ 0.17
CCDC40-206ENST00000572083 BMXP51813 675 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 DGUOKQ16854 277 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 DCXRQ7Z4W1 244 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 ZDHHC21Q8IVQ6 265 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 SLC15A3Q8IY34 581 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 FAM162AQ96A26 154 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 DUS3LQ96G46 650 aaKnown RBP16.14■□□□□ 0.17
CCDC40-206ENST00000572083 GAFA1Q96PS6 74 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 NPFFR1Q9GZQ6 430 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 ELL3Q9HB65 397 aaPredicted RBP16.14■□□□□ 0.17
CCDC40-206ENST00000572083 SAR1AQ9NR31 198 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 HAO2Q9NYQ3 351 aa16.14■□□□□ 0.17
CCDC40-206ENST00000572083 FAM32AQ9Y421 112 aaKnown RBP16.14■□□□□ 0.17
CCDC40-206ENST00000572083 NME4O00746 187 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 NCK1P16333 377 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 NDUFB7P17568 137 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 DDOSTP39656 456 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 FAM3AP98173 230 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.13■□□□□ 0.17
CCDC40-206ENST00000572083 SLC35F1Q5T1Q4 408 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 ATPAF1Q5TC12 328 aaPredicted RBP16.13■□□□□ 0.17
CCDC40-206ENST00000572083 SLC16A9Q7RTY1 509 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 PROKR2Q8NFJ6 384 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 OR4C15Q8NGM1 316 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 ZNRF4Q8WWF5 429 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 SPSB4Q96A44 273 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 ZNF702PQ9H963 129 aa16.13■□□□□ 0.17
CCDC40-206ENST00000572083 SF3B6Q9Y3B4 125 aaKnown RBP16.13■□□□□ 0.17
CCDC40-206ENST00000572083 ADARB2-AS1A8MUL3 147 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 TIPRLO75663 272 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 RHCEP18577 417 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 POU1F1P28069 291 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 SLC7A2P52569 658 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 EMX1Q04741 257 aaPredicted RBP16.12■□□□□ 0.17
CCDC40-206ENST00000572083 BLMHQ13867 455 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 TAF13Q15543 124 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 ZNF788Q6ZQV5 615 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 ARPINQ7Z6K5 226 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 OR4F17Q8NGA8 305 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 OR51L1Q8NGJ5 315 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 SLAMF6Q96DU3 332 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 RAB3IPQ96QF0 476 aaPredicted RBP16.12■□□□□ 0.17
CCDC40-206ENST00000572083 OR4F4Q96R69 305 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 KCNJ15Q99712 375 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 CITED2Q99967 270 aaPredicted RBP16.12■□□□□ 0.17
CCDC40-206ENST00000572083 FUZQ9BT04 418 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 TLNRD1Q9H1K6 362 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 MEGF9Q9H1U4 602 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 CENPMQ9NSP4 180 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 SERTAD4Q9NUC0 356 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 MRGBPQ9NV56 204 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 COMMD3-BMI1R4GMX3 469 aa16.12■□□□□ 0.17
CCDC40-206ENST00000572083 H0YAE9 185 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 K7EIL1 84 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 SPARCP09486 303 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 IGLL1P15814 213 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 GSK3BP49841 420 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 TIGD6Q17RP2 521 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 GFOD2Q3B7J2 385 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 NDUFA11Q86Y39 141 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 CYB561A3Q8NBI2 242 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 REEP6Q96HR9 211 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 PAPOLGQ9BWT3 736 aaKnown RBP16.11■□□□□ 0.17
CCDC40-206ENST00000572083 DNTTIP1Q9H147 329 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 AP3M1Q9Y2T2 418 aa16.11■□□□□ 0.17
CCDC40-206ENST00000572083 AKR7A2O43488 359 aa16.1■□□□□ 0.17
CCDC40-206ENST00000572083 ANXA2P07355 339 aaKnown RBP16.1■□□□□ 0.17
CCDC40-206ENST00000572083 GNALP38405 381 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms