RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 SUCLG1P53597 346 aaKnown RBP13.67□□□□□ -0.22
SMG6-207ENST00000570756 ZNF239Q16600 458 aaKnown RBP13.67□□□□□ -0.22
SMG6-207ENST00000570756 AADACL3Q5VUY0 350 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 C1orf140Q5VVS0 124 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 RPUSD3Q6P087 351 aaKnown RBP13.67□□□□□ -0.22
SMG6-207ENST00000570756 PNLDC1Q8NA58 520 aaKnown RBP13.67□□□□□ -0.22
SMG6-207ENST00000570756 LFNGQ8NES3 379 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 SLC26A10Q8NG04 563 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 OR13C9Q8NGT0 318 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 MAFIPQ8WZ33 124 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 ADAT3Q96EY9 351 aaPredicted RBP13.67□□□□□ -0.22
SMG6-207ENST00000570756 ARV1Q9H2C2 271 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 SUSD2Q9UGT4 822 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 SRPK3Q9UPE1 567 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 STRAPQ9Y3F4 350 aaKnown RBP13.67□□□□□ -0.22
SMG6-207ENST00000570756 ST8SIA5O15466 376 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 IFNA21P01568 189 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 GLRA1P23415 457 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
SMG6-207ENST00000570756 SPEM2Q0P670 501 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 ARFRP1Q13795 201 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 CLINT1Q14677 625 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 KLHL24Q6TFL4 600 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 RTN4RL2Q86UN3 420 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 PPP1R3BQ86XI6 285 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 ZNF383Q8NA42 475 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 PHOSPHO2Q8TCD6 241 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 SLAMF9Q96A28 289 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 C19orf12Q9NSK7 152 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 CENPMQ9NSP4 180 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 HDGFL3Q9Y3E1 203 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 LOC101059948A0A1B0GTJ6 334 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 A8MVM7 634 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 GMFGO60234 142 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 NUDT14O95848 222 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 ZNF20P17024 532 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 RPS23P62266 143 aaKnown RBP13.66□□□□□ -0.22
SMG6-207ENST00000570756 SLC35A1P78382 337 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 ZNF117Q03924 483 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 PCK2Q16822 640 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 GLIPR1L1Q6UWM5 242 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 LINC00346Q8IVM7 164 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 GTF3AQ92664 365 aaKnown RBP13.66□□□□□ -0.22
SMG6-207ENST00000570756 TMEM59Q9BXS4 323 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 SMDT1Q9H4I9 107 aa13.66□□□□□ -0.22
SMG6-207ENST00000570756 MRPS28Q9Y2Q9 187 aaKnown RBP13.66□□□□□ -0.22
SMG6-207ENST00000570756 A0A0A6YYD4 124 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 A6NIZ1 184 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 SOCS1O15524 211 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 PRKNO60260 465 aaPredicted RBP13.65□□□□□ -0.22
SMG6-207ENST00000570756 CDC14BO60729 498 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 TTRP02766 147 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 PRH1P02810 166 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 GP1BBP13224 206 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 RAP1BP61224 184 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 ERV3-1Q14264 604 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 DEFB110Q30KQ9 67 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 ZNF529Q6P280 563 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 STX12Q86Y82 276 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 KLHDC3Q9BQ90 382 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 FAM206AQ9NX38 181 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 EHFQ9NZC4 300 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 ARID1BQ8NFD5 2236 aaPredicted RBP13.65□□□□□ -0.22
SMG6-207ENST00000570756 TRIOO75962 3097 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 EPOPA6NHQ4 379 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 GPR37O15354 613 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 HCRTR1O43613 425 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 GJA4P35212 333 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 ECI1P42126 302 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 SEC13P55735 322 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 SLC26A5P58743 744 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 CSNK2A1P68400 391 aaPredicted RBP13.65□□□□□ -0.22
SMG6-207ENST00000570756 C14orf28Q4W4Y0 310 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 SOHLH1Q5JUK2 328 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 SSX9Q7RTT3 188 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 ZNF248Q8NDW4 579 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 CSNK2A3Q8NEV1 391 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 AKR7LQ8NHP1 331 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 RNF133Q8WVZ7 376 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 YPEL4Q96NS1 127 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 URM1Q9BTM9 101 aaKnown RBP13.65□□□□□ -0.22
SMG6-207ENST00000570756 LSM5Q9Y4Y9 91 aaKnown RBP13.65□□□□□ -0.22
SMG6-207ENST00000570756 TMEM184BQ9Y519 407 aaPredicted RBP13.65□□□□□ -0.22
SMG6-207ENST00000570756 CLDN16Q9Y5I7 305 aa13.65□□□□□ -0.22
SMG6-207ENST00000570756 A0A1B0GW64 132 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 PLPP3O14495 311 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 KNG1P01042 644 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 CLPSP04118 112 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 SLC2A1P11166 492 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 PGCP20142 388 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 TMEM104Q8NE00 496 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 OR10H5Q8NGA6 315 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 GINS3Q9BRX5 216 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 OR11A1Q9GZK7 315 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 PBOV1Q9GZY1 135 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 UNKLQ9H9P5 680 aaKnown RBP13.64□□□□□ -0.23
SMG6-207ENST00000570756 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms