RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 OR51A7Q8NH64 312 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 OR1F12Q8NHA8 337 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 C8orf46Q8TAG6 207 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 DNAJC9Q8WXX5 260 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 H1FXQ92522 213 aaKnown RBP9.04□□□□□ -0.96
VPS53-207ENST00000570510 SLC7A6OSQ96CW6 309 aaPredicted RBP9.04□□□□□ -0.96
VPS53-207ENST00000570510 RSRC1Q96IZ7 334 aaKnown RBP9.04□□□□□ -0.96
VPS53-207ENST00000570510 THTPAQ9BU02 230 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 DGCR6LQ9BY27 220 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 IL20Q9NYY1 176 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 VSX1Q9NZR4 365 aaPredicted RBP9.04□□□□□ -0.96
VPS53-207ENST00000570510 RHCGQ9UBD6 479 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 LYVE1Q9Y5Y7 322 aa9.04□□□□□ -0.96
VPS53-207ENST00000570510 DNAH3Q8TD57 4116 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 OR6C6A6NF89 314 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 TNFRSF11BO00300 401 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 NDUFB3O43676 98 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 DBHP09172 617 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 HOXA4Q00056 320 aaPredicted RBP9.03□□□□□ -0.96
VPS53-207ENST00000570510 MS4A2Q01362 244 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 MICBQ29980 383 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 TBPL2Q6SJ96 375 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 RASSF6Q6ZTQ3 369 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 MEPCEQ7L2J0 689 aaKnown RBP9.03□□□□□ -0.96
VPS53-207ENST00000570510 SLC36A1Q7Z2H8 476 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 C10orf67Q8IYJ2 551 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 RORBQ92753 470 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 NRBF2Q96F24 287 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 FAM46AQ96IP4 442 aaKnown RBP9.03□□□□□ -0.96
VPS53-207ENST00000570510 DDOQ99489 341 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 SLC22A4Q9H015 551 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 RERGLQ9H628 205 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 REEP1Q9H902 201 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 C1orf123Q9NWV4 160 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 ZMAT5Q9UDW3 170 aaKnown RBP9.03□□□□□ -0.96
VPS53-207ENST00000570510 KCNG2Q9UJ96 466 aa9.03□□□□□ -0.96
VPS53-207ENST00000570510 SF3B6Q9Y3B4 125 aaKnown RBP9.03□□□□□ -0.96
VPS53-207ENST00000570510 TRAV27A0A087WT01 109 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 TRBV23-1A0A0A0MS06 115 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 TEX13CA0A0J9YWL9 993 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 A0A1W2PQ09 198 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 DHRS12A0PJE2 317 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 CCNB2O95067 398 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 GRPP07492 148 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 ATP6V1B2P21281 511 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 CA6P23280 308 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 POU1F1P28069 291 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 GPR4P46093 362 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 BLVRAP53004 296 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 DLX1P56177 255 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 PRSS12P56730 875 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 MZT1Q08AG7 82 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 IKZF1Q13422 519 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 HABP2Q14520 560 aaPredicted RBP9.02□□□□□ -0.97
VPS53-207ENST00000570510 SEC23BQ15437 767 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 KCNMB1Q16558 191 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 MICAQ29983 383 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 LRRC10Q5BKY1 277 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 ZNF770Q6IQ21 691 aaPredicted RBP9.02□□□□□ -0.97
VPS53-207ENST00000570510 UNQ9370/PRO34162Q6UXP9 181 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 PLPP7Q8NBV4 271 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 SDR9C7Q8NEX9 313 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 OR52L1Q8NGH7 329 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 OR4C15Q8NGM1 316 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 OR13C2Q8NGS9 318 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 MUC7Q8TAX7 377 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 DMRTB1Q96MA1 342 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 ZNF570Q96NI8 536 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 OSBPL10Q9BXB5 764 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 KRTAP17-1Q9BYP8 105 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 PRSS22Q9GZN4 317 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 BOLA1Q9Y3E2 137 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 CDH10Q9Y6N8 788 aa9.02□□□□□ -0.97
VPS53-207ENST00000570510 IGHV3OR15-7A0A075B7D8 119 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 TCRBV3S1A0A5B6 114 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 H7C1C5 153 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 GSC2O15499 205 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 ANGPTL7O43827 346 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 GMDSO60547 372 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 KHDRBS3O75525 346 aaKnown RBP9.01□□□□□ -0.97
VPS53-207ENST00000570510 ALDOBP05062 364 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 SCG5P05408 212 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 BMXP51813 675 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 LGALS4P56470 323 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 LCN6P62502 163 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 KRR1Q13601 381 aaKnown RBP9.01□□□□□ -0.97
VPS53-207ENST00000570510 FLOT2Q14254 428 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 SLC36A3Q495N2 470 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 KHDC1LQ5JSQ8 128 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 CYP2R1Q6VVX0 501 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 PGAP1Q75T13 922 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 FAM90A1Q86YD7 464 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 GLB1L2Q8IW92 636 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 ADGRG5Q8IZF4 528 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 LY6G5BQ8NDX9 201 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 OR52J3Q8NH60 311 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 FANK1Q8TC84 345 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 SLCO4A1Q96BD0 722 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms