RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 NDUFA13Q9P0J0 144 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 CGGBP1Q9UFW8 167 aaPredicted RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 RSL24D1Q9UHA3 163 aaKnown RBP5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 FZR1Q9UM11 496 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 STARD10Q9Y365 291 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 FREM3P0C091 2139 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 DOCK7Q96N67 2140 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 ARHGAP21Q5T5U3 1957 aa5.66□□□□□ -1.5
CTDNEP1-204ENST00000570484 PHF3Q92576 2039 aaKnown RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF462Q96JM2 2506 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 TRBV5-5A0A0J9YX44 114 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 TRDV1A0A1B0GX56 115 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 C5orf63A6NC05 138 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 CD300LBA8K4G0 201 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 DEFB108AA8MXU0 73 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 SHISA9B4DS77 424 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 M0R233 179 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 PDCD5O14737 125 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC22A1O15245 554 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 SULT1B1O43704 296 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 RAF1P04049 648 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 HCKP08631 526 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR4A8P0C604 315 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 FSTP19883 344 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 RAB3AP20336 220 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 MPV17P39210 176 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMBIM6P55061 237 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 LSM3P62310 102 aaKnown RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 NKX6-1P78426 367 aaPredicted RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 FAM3AP98173 230 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 FABP5Q01469 135 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 MZT1Q08AG7 82 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF672Q499Z4 452 aaPredicted RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 CLVS2Q5SYC1 327 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR2T2Q6IF00 324 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 USP43Q70EL4 1123 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 ANKRD13BQ86YJ7 626 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 SERPINA12Q8IW75 414 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZDHHC23Q8IYP9 409 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 NKAIN3Q8N8D7 197 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR13C9Q8NGT0 318 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR10AC1Q8NH08 325 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 UBASH3BQ8TF42 649 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMEM171Q8WVE6 324 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 RPL3LQ92901 407 aaKnown RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 PIGTQ969N2 578 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 MRPL24Q96A35 216 aaKnown RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 TMIGD2Q96BF3 282 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 FGGYQ96C11 551 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 ISOC1Q96CN7 298 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 MARS2Q96GW9 593 aaKnown RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 LYZL4Q96KX0 146 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 DHRS9Q9BPW9 319 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 RTL8AQ9BWD3 113 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC22A4Q9H015 551 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 OR51E2Q9H255 320 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 POFUT1Q9H488 388 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 UBTD1Q9HAC8 227 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 NOX4Q9NPH5 578 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 CYSLTR2Q9NS75 346 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF275Q9NSD4 429 aaPredicted RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 TAS2R4Q9NYW5 299 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 CISD1Q9NZ45 108 aaKnown RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 MRPL15Q9P015 296 aaKnown RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 ZNF319Q9P2F9 582 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 PURGQ9UJV8 347 aaKnown RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 FBXO9Q9UK97 447 aaPredicted RBP5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 SLC7A11Q9UPY5 501 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 MPC1Q9Y5U8 109 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 V9GYS6 101 aa5.65□□□□□ -1.5
CTDNEP1-204ENST00000570484 COL6A6A6NMZ7 2263 aa5.65□□□□□ -1.51
CTDNEP1-204ENST00000570484 FAM208BQ5VWN6 2430 aa5.65□□□□□ -1.51
CTDNEP1-204ENST00000570484 A0A1B0GTI1 187 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 A0A1W2PPK0 400 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 CLEC18AA5D8T8 446 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 IQCF6A8MYZ5 107 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 HS3ST1O14792 307 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 TPD52L2O43399 206 aaKnown RBP5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 GPX5O75715 221 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 CLDN1O95832 211 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 NRASP01111 189 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 IGLV3-1P01715 115 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 MAS1P04201 325 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 UCHL1P09936 223 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZNF250P15622 560 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 KITLGP21583 273 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 PRKACBP22694 351 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 ANOS1P23352 680 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 TNFSF4P23510 183 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 ACKR3P25106 362 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 FGF9P31371 208 aaPredicted RBP5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 APOBEC3AP31941 199 aaPredicted RBP5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 SOX6P35712 828 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 SERPINF1P36955 418 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 RANBP1P43487 201 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 SERPINB10P48595 397 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 MTNR1BP49286 362 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 VBP1P61758 197 aa5.64□□□□□ -1.51
CTDNEP1-204ENST00000570484 SRSF1Q07955 248 aaKnown RBP eCLIP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms