RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 OR51L1Q8NGJ5 315 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 OR52N5Q8NH56 324 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 PNPT1Q8TCS8 783 aaKnown RBP5.29□□□□□ -1.56
LINC00556-201ENST00000569603 SCARB1Q8WTV0 552 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 XAGE5Q8WWM1 108 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 RAB40AQ8WXH6 277 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 MUCL1Q96DR8 90 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 ZNF385AQ96PM9 386 aaKnown RBP5.29□□□□□ -1.56
LINC00556-201ENST00000569603 CCT8L2Q96SF2 557 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 SLC35A5Q9BS91 424 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 BCL2L14Q9BZR8 327 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 C20orf141Q9NUB4 165 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 FAIMQ9NVQ4 179 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 AIG1Q9NVV5 245 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 B3GAT1Q9P2W7 334 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 FLVCR2Q9UPI3 526 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 PIGLQ9Y2B2 252 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 TMED7Q9Y3B3 224 aa5.29□□□□□ -1.56
LINC00556-201ENST00000569603 TRAV26-1A0A087WT03 109 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 ZNF729A6NN14 1252 aaPredicted RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 ATP6V1G2-DDX39BF2Z307 99 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 TEX46H3BTG2 121 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 KLF11O14901 512 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 TM9SF1O15321 606 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 PHF1O43189 567 aaPredicted RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 SSX4O60224 188 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 EIF1BO60739 113 aaKnown RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 MRPL33O75394 65 aaKnown RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 LY6HO94772 140 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 SNAP29O95721 258 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 APOC1P02654 83 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 IGHV4-31P0DP07 118 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 SLC25A16P16260 332 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 LBPP18428 481 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 GSTM3P21266 225 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 BGNP21810 368 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 MPGP29372 298 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 MAS1LP35410 378 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 OMPP47874 163 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 ERFP50548 548 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 PPT1P50897 306 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 POLR2HP52434 150 aaKnown RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 EFNA4P52798 201 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 SLC35A1P78382 337 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 IL13RA1P78552 427 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 ROM1Q03395 351 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 EGR4Q05215 589 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 FOXL1Q12952 345 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 TATDN3Q17R31 274 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 ZSWIM7Q19AV6 140 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 KRTAP24-1Q3LI83 254 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 CHRFAM7AQ494W8 412 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 RNASEKQ6P5S7 137 aaKnown RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 ZNF836Q6ZNA1 936 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 PATL1Q86TB9 770 aaKnown RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 MYPOPQ86VE0 399 aaPredicted RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 ZNF575Q86XF7 245 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 LDLRAD3Q86YD5 345 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 TMEM99Q8N816 258 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 OR2D3Q8NGH3 330 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 SLC38A5Q8WUX1 472 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 SNX33Q8WV41 574 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 FAM46BQ96A09 425 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 DNAJA3Q96EY1 480 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 RAB40CQ96S21 281 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 PTDSS2Q9BVG9 487 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 DPY30Q9C005 99 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 MTHFD2LQ9H903 347 aaPredicted RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 RLIMQ9NVW2 624 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 MYEF2Q9P2K5 600 aaKnown RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 EIF3KQ9UBQ5 218 aaKnown RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 MARCOQ9UEW3 520 aaPredicted RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 GPR132Q9UNW8 380 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 SPIN1Q9Y657 262 aaPredicted RBP5.28□□□□□ -1.56
LINC00556-201ENST00000569603 WNK1Q9H4A3 2382 aa5.28□□□□□ -1.56
LINC00556-201ENST00000569603 IGKV1D-42A0A075B6H8 117 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 IGHV1-18A0A0C4DH31 117 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 IGHV4-61A0A0C4DH41 118 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 A0A0U1RRA0 63 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 SMCO3A2RU48 225 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 ZNF98A6NK75 572 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 CCSO14618 274 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 OGG1O15527 345 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 CPSF4O95639 269 aaKnown RBP5.27□□□□□ -1.57
LINC00556-201ENST00000569603 IGKV3-15P01624 115 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 AMY1AP04745 511 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 DBIP07108 87 aaKnown RBP5.27□□□□□ -1.57
LINC00556-201ENST00000569603 CRYGBP07316 175 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 GKN3PP0CG01 181 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 IGFBP5P24593 272 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 CRABP1P29762 137 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 SLC6A6P31641 620 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 S100A3P33764 101 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 TGFBR2P37173 567 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 MRPL19P49406 292 aaKnown RBP5.27□□□□□ -1.57
LINC00556-201ENST00000569603 MMP15P51511 669 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 NUDT6P53370 316 aa5.27□□□□□ -1.57
LINC00556-201ENST00000569603 OR2B6P58173 313 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms