RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-216	ENST00000569151	CLDN2	P57739	230 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	HIST1H2BD	P58876	126 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	CTXN1	P60606	82 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	HIST1H2BC	P62807	126 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	SUPT4H1	P63272	117 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	BTN3A2	P78410	334 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	PSG6	Q00889	435 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	SP3	Q02447	781 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	SPOCK1	Q08629	439 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	MGAT2	Q10469	447 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ENPP2	Q13822	863 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	EBP	Q15125	230 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ELOB	Q15370	118 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	RSU1	Q15404	277 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	HIST2H2BE	Q16778	126 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	HNRNPA1L2	Q32P51	320 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ANKRD39	Q53RE8	183 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	MEST	Q5EB52	335 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	NCMAP	Q5T1S8	102 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	FNDC7	Q5VTL7	733 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	TMEM215	Q68D42	235 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	DNM1P34	Q6PK57	102 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	VHLL	Q6RSH7	139 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	DLK2	Q6UY11	383 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ETV3L	Q6ZN32	361 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	KCTD9	Q7L273	389 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	DPY19L4	Q7Z388	723 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	TMEM25	Q86YD3	366 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	TGIF2LY	Q8IUE0	185 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	C1orf87	Q8N0U7	546 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	BOLL	Q8N9W6	283 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	SUMF2	Q8NBJ7	301 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	CCDC54	Q8NEL0	328 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	OR51L1	Q8NGJ5	315 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	OR51A4	Q8NGJ6	313 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	OR10AC1	Q8NH08	325 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	OR4K15	Q8NH41	348 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ZNF519	Q8TB69	540 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	FNDC9	Q8TBE3	224 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ZPLD1	Q8TCW7	415 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ZNRF4	Q8WWF5	429 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	HIST1H2BH	Q93079	126 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ARRDC3	Q96B67	414 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	FGGY	Q96C11	551 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	C8orf44	Q96CB5	159 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	MARS2	Q96GW9	593 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ACY3	Q96HD9	319 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	BTF3L4	Q96K17	158 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	VSTM2L	Q96N03	204 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ZNF558	Q96NG5	402 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	IP6K3	Q96PC2	410 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	SMAD5	Q99717	465 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	CMKLR1	Q99788	373 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	HIST1H2BN	Q99877	126 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	HIST1H2BM	Q99879	126 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	SYT3	Q9BQG1	590 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	PIGQ	Q9BRB3	760 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ANGPTL4	Q9BY76	406 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	TBL1XR1	Q9BZK7	514 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	OR11A1	Q9GZK7	315 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	CTDSP1	Q9GZU7	261 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	PTGES2	Q9H7Z7	377 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	ELOVL3	Q9HB03	270 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151		Q9N2J8	555 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	TAS2R4	Q9NYW5	299 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	PRODH2	Q9UF12	536 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	SLC23A2	Q9UGH3	650 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	DKKL1	Q9UK85	242 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	OR52A1	Q9UKL2	312 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	C14orf166	Q9Y224	244 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	OSGIN2	Q9Y236	505 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	FARSA	Q9Y285	508 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	AMDHD2	Q9Y303	409 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	MRPS18B	Q9Y676	258 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-216	ENST00000569151		V9GYS6	101 aa		4.08	□□□□□ -1.76
BBS4-216	ENST00000569151	MKI67	P46013	3256 aa	Known RBP	4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	IGLV1-36	A0A0B4J1U3	117 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	TRAV1-1	A0A0B4J248	108 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151		A0A1W2PPE2	198 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	FAM230A	A0A1W2PPH8	454 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	PRSS37	A4D1T9	235 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	ZNF726	A6NNF4	738 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151		A8MVM7	634 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	GRXCR1	A8MXD5	290 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	CDRT15L2	A8MXV6	281 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151		C9J4A7	227 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	FTCDNL1	E5RQL4	147 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	PSMD9	O00233	223 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	CYR61	O00622	381 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	CLDN4	O14493	209 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	XKRY	O14609	159 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	FOXS1	O43638	330 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	PITX3	O75364	302 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	CRTAP	O75718	401 aa	Predicted RBP	4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	DFFB	O76075	338 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	CSTA	P01040	98 aa		4.07	□□□□□ -1.76
BBS4-216	ENST00000569151	IGLV1-40	P01703	118 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms