RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 FAM3AP98173 230 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 IL5RAQ01344 420 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 TSPAN31Q12999 210 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 IKZF1Q13422 519 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 TEX30Q5JUR7 227 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 STUMQ69YW2 141 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 GLYATQ6IB77 296 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 SLC16A9Q7RTY1 509 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 LNX2Q8N448 690 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 FAM86B1Q8N7N1 296 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 CSNK2A3Q8NEV1 391 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 OR52L1Q8NGH7 329 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 OR52H1Q8NGJ2 320 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 OR5D13Q8NGL4 314 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 OR9Q1Q8NGQ5 310 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 SLAMF6Q96DU3 332 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 DNAJB11Q9UBS4 358 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 SF3B6Q9Y3B4 125 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 COMMD3-BMI1R4GMX3 469 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 A0A1B0GW55 424 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 TMEM210A6NLX4 147 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 ANXA2P2A6NMY6 339 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 H3BUX3 64 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 CCDC22O60826 627 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DIRAS1O95057 198 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DUX4L2P0CJ85 424 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DUX4L3P0CJ86 424 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DUX4L4P0CJ87 422 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DUX4L5P0CJ88 424 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DUX4L6P0CJ89 424 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DUX4L7P0CJ90 424 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 FMO3P31513 532 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 ENTPD1P49961 510 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 CAV3P56539 151 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 SPIBQ01892 262 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 TIGD6Q17RP2 521 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 SLC35F1Q5T1Q4 408 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DUX4L9Q6RFH8 374 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 WDR86Q86TI4 376 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 OR4S1Q8NGB4 309 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 OR51G2Q8NGK0 314 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 GNPDA2Q8TDQ7 276 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 H1FXQ92522 213 aaKnown RBP12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 SSX3Q99909 188 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 MICU1Q9BPX6 476 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 MEGF9Q9H1U4 602 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 RGCCQ9H4X1 137 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 GORASP2Q9H8Y8 452 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 CENPMQ9NSP4 180 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 DUX4Q9UBX2 424 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 MPC1Q9Y5U8 109 aa12.87□□□□□ -0.35
HERPUD1-215ENST00000568676 CDIPTO14735 213 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 TBX1O43435 398 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 SPARCP09486 303 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 SLC2A1P11166 492 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 PYCR1P32322 319 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 RPS27P42677 84 aaKnown RBP12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 LOXL3P58215 753 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 CSNK2BP67870 215 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 EMX1Q04741 257 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 CGB2Q6NT52 195 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 ZNF788Q6ZQV5 615 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 FGFRL1Q8N441 504 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 LINC00471Q8N535 108 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 MCUR1Q96AQ8 359 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 REEP6Q96HR9 211 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 PYURFQ96I23 114 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 CLPTM1LQ96KA5 538 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 RAB3IPQ96QF0 476 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 DDOQ99489 341 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 RTL8AQ9BWD3 113 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 NPFFR1Q9GZQ6 430 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 SPAG4Q9NPE6 437 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 ADA2Q9NZK5 511 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 SLC25A10Q9UBX3 287 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 CDH10Q9Y6N8 788 aa12.86□□□□□ -0.35
HERPUD1-215ENST00000568676 TRBV23-1A0A0A0MS06 115 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 hCG_38984A0A1B0GV85 526 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 A0A1W2PQ09 198 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 A0A1W2PRD5 423 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 A0A1W2PRF3 423 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 A0A1W2PRM7 423 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 TVP23AA6NH52 213 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 SASH3O75995 380 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 ANXA2P07355 339 aaKnown RBP12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 AMY2BP19961 511 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 ANOS1P23352 680 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 HSD11B1P28845 292 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 CX3CR1P49238 355 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 NUDT2P50583 147 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 KLRD1Q13241 179 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 LRRC75BQ2VPJ9 315 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 KLHDC1Q8N7A1 406 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 PAPD5Q8NDF8 572 aaKnown RBP12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 PPP1R35Q8TAP8 253 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 MRAPQ8TCY5 172 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 SGK3Q96BR1 496 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 ITPKCQ96DU7 683 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms