RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 RAB11BQ15907 218 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 NNATQ16517 81 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 PCK2Q16822 640 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 ZNF542PQ5EBM4 170 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 CLLU1Q5K131 121 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 C10orf25Q5T742 122 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 HES5Q5TA89 166 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 TMEM244Q5VVB8 128 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 C1orf140Q5VVS0 124 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 HIST2H2BCQ6DN03 193 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 CBLN3Q6UW01 205 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 TEX261Q6UWH6 196 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 GLDNQ6ZMI3 551 aaPredicted RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 LRRTM1Q86UE6 522 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 GLCCI1Q86VQ1 547 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 RFLNBQ8N5W9 214 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 ZNF441Q8N8Z8 693 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 UXS1Q8NBZ7 420 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 ADPRHL1Q8NDY3 354 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 OR11H7Q8NGC8 314 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 OR5L2Q8NGL0 311 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 OR6M1Q8NGM8 313 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 OR13C5Q8NGS8 318 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 OR6N1Q8NGY5 312 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 MFSD8Q8NHS3 518 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 ZNF519Q8TB69 540 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 DOK4Q8TEW6 326 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 TSEN15Q8WW01 171 aaKnown RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 C17orf50Q8WW18 174 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 HSD17B8Q92506 261 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 SNAPC3Q92966 411 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 SLC25A38Q96DW6 304 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 OMA1Q96E52 524 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 KTI12Q96EK9 354 aaPredicted RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 ZNF48Q96MX3 618 aaPredicted RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 GAL3ST4Q96RP7 486 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 BEX2Q9BXY8 128 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 ALX4Q9H161 411 aaPredicted RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 SYT4Q9H2B2 425 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 SDHAF3Q9NRP4 125 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 PNO1Q9NRX1 252 aaKnown RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 PLSCR3Q9NRY6 295 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 ELOVL5Q9NYP7 299 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 C19orf25Q9UFG5 118 aaPredicted RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 OR5V1Q9UGF6 321 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 UBQLN2Q9UHD9 624 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 KCNG2Q9UJ96 466 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 ZNF346Q9UL40 294 aaKnown RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 MGAT4AQ9UM21 535 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 HHLA2Q9UM44 414 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 PPIEQ9UNP9 301 aaKnown RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 B9D1Q9UPM9 204 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 DHDHQ9UQ10 334 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 RCE1Q9Y256 329 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 TMED7Q9Y3B3 224 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 MAB21L2Q9Y586 359 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 U3KQ87 197 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 MED13Q9UHV7 2174 aa4.65□□□□□ -1.67
CAPN3-217ENST00000567817 MDC1Q14676 2089 aaKnown RBP4.65□□□□□ -1.67
CAPN3-217ENST00000567817 NAV3Q8IVL0 2385 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 IGHV1OR21-1A0A087WYE8 117 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 IGLV3-32A0A0A0MS00 114 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 LY6G6EA0A0G2JKS1 128 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 A0A1W2PNV4 684 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 A0A1W2PPK0 400 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 LOC390937A0A1W2PQ73 354 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 METTL21EPA6NDL7 271 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 ANKUB1A6NFN9 424 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 HMSDA8MTL9 139 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 NTN3O00634 580 aaPredicted RBP4.64□□□□□ -1.67
CAPN3-217ENST00000567817 PLPP3O14495 311 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 FADS1O60427 444 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 SDC3O75056 442 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 OR2A4O95047 310 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 RPP14O95059 124 aaKnown RBP4.64□□□□□ -1.67
CAPN3-217ENST00000567817 PMS2P2O95744 297 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 NUDT14O95848 222 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 HLA-DQA2P01906 255 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 GIMD1P0DJR0 217 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 TNFSF4P23510 183 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 CDK2P24941 298 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 ABCD3P28288 659 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 DUSP1P28562 367 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 AGTR1P30556 359 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 PRSS3P35030 304 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 PSMB10P40306 273 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 NR0B1P51843 470 aaKnown RBP4.64□□□□□ -1.67
CAPN3-217ENST00000567817 AP2S1P53680 142 aaPredicted RBP4.64□□□□□ -1.67
CAPN3-217ENST00000567817 HCCSP53701 268 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 GFERP55789 205 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 FGL1Q08830 312 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 MEF2DQ14814 521 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 GRK1Q15835 563 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 ACKR1Q16570 336 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 MEP1BQ16820 701 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 Q5BKY6 102 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 FAM90A2PQ658T7 463 aa4.64□□□□□ -1.67
CAPN3-217ENST00000567817 LAMTOR1Q6IAA8 161 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms