RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SSX3Q99909 188 aa12.63□□□□□ -0.39
PALB2-205ENST00000567003 KCTD14Q9BQ13 255 aaPredicted RBP12.63□□□□□ -0.39
PALB2-205ENST00000567003 RNPEPL1Q9HAU8 725 aa12.63□□□□□ -0.39
PALB2-205ENST00000567003 ELL3Q9HB65 397 aaPredicted RBP12.63□□□□□ -0.39
PALB2-205ENST00000567003 CENPMQ9NSP4 180 aa12.63□□□□□ -0.39
PALB2-205ENST00000567003 AURKAIP1Q9NWT8 199 aaPredicted RBP12.63□□□□□ -0.39
PALB2-205ENST00000567003 ZNF391Q9UJN7 358 aa12.63□□□□□ -0.39
PALB2-205ENST00000567003 AP3M1Q9Y2T2 418 aa12.63□□□□□ -0.39
PALB2-205ENST00000567003 MEGF11A6BM72 1044 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 SPARCP09486 303 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 GRK5P34947 590 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 LOXL3P58215 753 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 FAM3AP98173 230 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 SPIBQ01892 262 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 MZT1Q08AG7 82 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 TAF13Q15543 124 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 DGUOKQ16854 277 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 LRRC10Q5BKY1 277 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 HCP5Q6MZN7 132 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 SLC16A9Q7RTY1 509 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 REC114Q7Z4M0 266 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 BEND2Q8NDZ0 799 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 OR4C13Q8NGP0 309 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 OR9Q1Q8NGQ5 310 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 C8orf46Q8TAG6 207 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 SLAMF6Q96DU3 332 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 AJUBAQ96IF1 538 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 KCNG2Q9UJ96 466 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 COMMD3-BMI1R4GMX3 469 aa12.62□□□□□ -0.39
PALB2-205ENST00000567003 A0A1W2PQ09 198 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 CHST1O43916 411 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 COX4I1P13073 169 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 KIR2DS4P43632 304 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 UBE2E1P51965 193 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 GFOD2Q3B7J2 385 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 KLHL12Q53G59 568 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 ZBTB37Q5TC79 503 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 C8orf82Q6P1X6 216 aaPredicted RBP12.61□□□□□ -0.39
PALB2-205ENST00000567003 SGCDQ92629 289 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 RPL3LQ92901 407 aaKnown RBP12.61□□□□□ -0.39
PALB2-205ENST00000567003 SPSB4Q96A44 273 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 REEP6Q96HR9 211 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 KCNJ15Q99712 375 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 MMP28Q9H239 520 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 EGLN3Q9H6Z9 239 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 MAB21L2Q9Y586 359 aa12.61□□□□□ -0.39
PALB2-205ENST00000567003 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 XRCC2O43543 280 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 ANGPTL7O43827 346 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 GYPBP06028 91 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 ANXA2P07355 339 aaKnown RBP12.6□□□□□ -0.39
PALB2-205ENST00000567003 CD28P10747 220 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 NDUFB7P17568 137 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 CX3CR1P49238 355 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
PALB2-205ENST00000567003 KRT72Q14CN4 511 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 TIGD6Q17RP2 521 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 CRIP3Q6Q6R5 217 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 ZNF511Q8NB15 262 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 OR51G2Q8NGK0 314 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 OR2T6Q8NHC8 308 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 PPP1R14AQ96A00 147 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 PHF21AQ96BD5 680 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 SGK3Q96BR1 496 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 DUS3LQ96G46 650 aaKnown RBP12.6□□□□□ -0.39
PALB2-205ENST00000567003 CLPTM1LQ96KA5 538 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 DDOQ99489 341 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 NKX3-1Q99801 234 aaPredicted RBP12.6□□□□□ -0.39
PALB2-205ENST00000567003 PAPOLGQ9BWT3 736 aaKnown RBP12.6□□□□□ -0.39
PALB2-205ENST00000567003 FGF23Q9GZV9 251 aaPredicted RBP12.6□□□□□ -0.39
PALB2-205ENST00000567003 OPA3Q9H6K4 179 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 MRGBPQ9NV56 204 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 NECAP2Q9NVZ3 263 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 HAO2Q9NYQ3 351 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 SLC25A10Q9UBX3 287 aaPredicted RBP12.6□□□□□ -0.39
PALB2-205ENST00000567003 RHBDD3Q9Y3P4 386 aa12.6□□□□□ -0.39
PALB2-205ENST00000567003 hCG_38984A0A1B0GV85 526 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 M0R1W7 72 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 AKR7A2O43488 359 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 GADD45GO95257 159 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 POU1F1P28069 291 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 DDOSTP39656 456 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
PALB2-205ENST00000567003 GSSP48637 474 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 NUDT2P50583 147 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 BMXP51813 675 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 MXRA7P84157 204 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 ACSM1Q08AH1 577 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 LRRC75BQ2VPJ9 315 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 ATPAF1Q5TC12 328 aaPredicted RBP12.59□□□□□ -0.39
PALB2-205ENST00000567003 NCR3LG1Q68D85 454 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 GLYATQ6IB77 296 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 ZNF788Q6ZQV5 615 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 FAM57BQ71RH2 274 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 OR4C15Q8NGM1 316 aa12.59□□□□□ -0.39
PALB2-205ENST00000567003 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
PALB2-205ENST00000567003 C12orf43Q96C57 262 aaKnown RBP12.59□□□□□ -0.39
PALB2-205ENST00000567003 RAB3IPQ96QF0 476 aaPredicted RBP12.59□□□□□ -0.39
PALB2-205ENST00000567003 TLNRD1Q9H1K6 362 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms