RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ZNF43P17038 809 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 ADCYAP1P18509 176 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 GLRA1P23415 457 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 SLC6A9P48067 706 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 ZNF529Q6P280 563 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 LDLRAD3Q86YD5 345 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 OR56B1Q8NGI3 324 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 URM1Q9BTM9 101 aaKnown RBP12.58□□□□□ -0.4
CDH1-209ENST00000566510 EHFQ9NZC4 300 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 ADAMTS9Q9P2N4 1935 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 SIGLEC6O43699 453 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 RAMP1O60894 148 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 OR2J2O76002 312 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 GLB1P16278 677 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 AKR1D1P51857 326 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 SUMO3P55854 103 aaPredicted RBP12.57□□□□□ -0.4
CDH1-209ENST00000566510 SCRN3Q0VDG4 424 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 ANKRD55Q3KP44 614 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 H3F3CQ6NXT2 135 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 ARRDC1Q8N5I2 433 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 OR5T2Q8NGG2 359 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 OR51F2Q8NH61 342 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 OR10C1Q96KK4 312 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 CDC6Q99741 560 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 ACKR4Q9NPB9 350 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 VPS13AQ96RL7 3174 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 F5H5K5 113 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 FGF16O43320 207 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 KLK2P20151 261 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 SERPINA2P20848 420 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 SNU13P55769 128 aaKnown RBP12.57□□□□□ -0.4
CDH1-209ENST00000566510 SMAD4Q13485 552 aaKnown RBP12.57□□□□□ -0.4
CDH1-209ENST00000566510 PLPPR5Q32ZL2 321 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 TMEM176BQ3YBM2 270 aaPredicted RBP12.57□□□□□ -0.4
CDH1-209ENST00000566510 PNLDC1Q8NA58 520 aaKnown RBP12.57□□□□□ -0.4
CDH1-209ENST00000566510 SLC30A7Q8NEW0 376 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 STOML3Q8TAV4 291 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 LIN37Q96GY3 246 aaPredicted RBP12.57□□□□□ -0.4
CDH1-209ENST00000566510 MRGPRX4Q96LA9 322 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 C1orf147Q96MC9 270 aaPredicted RBP12.57□□□□□ -0.4
CDH1-209ENST00000566510 TLNRD1Q9H1K6 362 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 OR10A2Q9H208 303 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 MOB1AQ9H8S9 216 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 SDK2Q58EX2 2172 aa12.57□□□□□ -0.4
CDH1-209ENST00000566510 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 F8VVB4 439 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 F8VWA3 439 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 FARS2O95363 451 aaKnown RBP12.56□□□□□ -0.4
CDH1-209ENST00000566510 ZNF17P17021 662 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 PVALBP20472 110 aaPredicted RBP12.56□□□□□ -0.4
CDH1-209ENST00000566510 BLVRBP30043 206 aaPredicted RBP12.56□□□□□ -0.4
CDH1-209ENST00000566510 RAB32Q13637 225 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 NKAIN1Q4KMZ8 207 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 SPAG16Q8N0X2 631 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 SLC25A45Q8N413 288 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 OR13G1Q8NGZ3 307 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 POC1BQ8TC44 478 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 CYTL1Q9NRR1 136 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 ZNF701Q9NV72 531 aaPredicted RBP12.56□□□□□ -0.4
CDH1-209ENST00000566510 FBLN5Q9UBX5 448 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 C5orf63A6NC05 138 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 TIAF1O95411 115 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 SUPT4H1P63272 117 aaKnown RBP12.56□□□□□ -0.4
CDH1-209ENST00000566510 ACTBL2Q562R1 376 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 VAX1Q5SQQ9 334 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 DRAM2Q6UX65 266 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 C1QL2Q7Z5L3 287 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 NFAM1Q8NET5 270 aaPredicted RBP12.56□□□□□ -0.4
CDH1-209ENST00000566510 PGAM5Q96HS1 289 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 OR6C1Q96RD1 312 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 S100A13Q99584 98 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
CDH1-209ENST00000566510 RAB18Q9NP72 206 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 FAM96BQ9Y3D0 163 aa12.56□□□□□ -0.4
CDH1-209ENST00000566510 STMND1H3BQB6 276 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 GUCA1AP43080 201 aaPredicted RBP12.55□□□□□ -0.4
CDH1-209ENST00000566510 FLI1Q01543 452 aaPredicted RBP12.55□□□□□ -0.4
CDH1-209ENST00000566510 KISS1Q15726 138 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 NUBPLQ8TB37 319 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 SCGB3A2Q96PL1 93 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 NUDT16L1Q9BRJ7 211 aaKnown RBP12.55□□□□□ -0.4
CDH1-209ENST00000566510 KLHL13Q9P2N7 655 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 WIF1Q9Y5W5 379 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 IGKV1-9A0A0C4DH69 117 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 E9PLN8 166 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 TRAF3IP2O43734 574 aaPredicted RBP12.55□□□□□ -0.4
CDH1-209ENST00000566510 FPR2P25090 351 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 RSPO4Q2I0M5 234 aaPredicted RBP12.55□□□□□ -0.4
CDH1-209ENST00000566510 CHRFAM7AQ494W8 412 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 PRAMEF20Q5VT98 475 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 RHBDD2Q6NTF9 364 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 PRSS54Q6PEW0 395 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 DOK3Q7L591 496 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 LRRC18Q8N456 261 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 OR10Z1Q8NGY1 313 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 OCSTAMPQ9BR26 566 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 PRELID3BQ9Y3B1 194 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 TRBV6-7A0A0A0MS04 114 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms