RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 INPP1P49441 399 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 MMP16P51512 607 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ACTA2P62736 377 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ACTG2P63267 376 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 MRPS15P82914 257 aaKnown RBP10.87□□□□□ -0.67
SF3B3-206ENST00000565990 GALK2Q01415 458 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 TLE4Q04727 773 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 SPOCK1Q08629 439 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 MRPL28Q13084 256 aaKnown RBP10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF672Q499Z4 452 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-206ENST00000565990 CDONQ4KMG0 1287 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ZMAT1Q5H9K5 638 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ARL9Q6T311 187 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 TMEM91Q6ZNR0 172 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 SPATC1Q76KD6 591 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 LHFPL3Q86UP9 236 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-206ENST00000565990 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 CAPSLQ8WWF8 208 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 TMEM203Q969S6 136 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ZCCHC4Q9H5U6 513 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 PLEKHF2Q9H8W4 249 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 CDH20Q9HBT6 801 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 DIABLOQ9NR28 239 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ING3Q9NXR8 418 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 EIF3KQ9UBQ5 218 aaKnown RBP10.87□□□□□ -0.67
SF3B3-206ENST00000565990 MRM2Q9UI43 246 aaKnown RBP10.87□□□□□ -0.67
SF3B3-206ENST00000565990 PLCE1Q9P212 2302 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ACOD1A6NK06 481 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 E7EQL1 145 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 F5H5K5 113 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 CTDSPLO15194 276 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 GPRIN2O60269 458 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 SRSF10O75494 262 aaKnown RBP10.86□□□□□ -0.67
SF3B3-206ENST00000565990 SNAPC5O75971 98 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 ABHD16AO95870 558 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 LALBAP00709 142 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 C1QBP02746 253 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 H2BFMP0C1H6 154 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 AZGP1P25311 298 aaKnown RBP10.86□□□□□ -0.67
SF3B3-206ENST00000565990 PITPNAQ00169 270 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 TNK1Q13470 666 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 IL18Q14116 193 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 TAF13Q15543 124 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 CCDC58Q4VC31 144 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 HIST2H2BCQ6DN03 193 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 SLC22A25Q6T423 547 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 LRRN1Q6UXK5 716 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 UNQ6126/PRO20091Q6UXV3 157 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF704Q6ZNC4 412 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-206ENST00000565990 KRT77Q7Z794 578 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 KLBQ86Z14 1044 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF101Q8IZC7 436 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 TMEM171Q8WVE6 324 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 APOBEC3DQ96AK3 386 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-206ENST00000565990 RNF170Q96K19 258 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 TBX5Q99593 518 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 BCL2L14Q9BZR8 327 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF442Q9H7R0 627 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 ELOVL3Q9HB03 270 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 CISD1Q9NZ45 108 aaKnown RBP10.86□□□□□ -0.67
SF3B3-206ENST00000565990 COMMD3Q9UBI1 195 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 LRP12Q9Y561 859 aa10.86□□□□□ -0.67
SF3B3-206ENST00000565990 ROS1P08922 2347 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 BAHCC1Q9P281 2608 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 M0R135 149 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 MAGEB4O15481 346 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-206ENST00000565990 OGG1O15527 345 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 SSX4O60224 188 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 HPGDSO60760 199 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 SMPD2O60906 423 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 ARL6IP5O75915 188 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 PNPP00491 289 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 TACSTD2P09758 323 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF250P15622 560 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 CCNOP22674 350 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 LIPNQ5VXI9 398 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF787Q6DD87 383 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 DMKNQ6E0U4 476 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-206ENST00000565990 FDX2Q6P4F2 183 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 ZFAND1Q8TCF1 268 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 SNX33Q8WV41 574 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 AKAP1Q92667 903 aaKnown RBP eCLIP10.85□□□□□ -0.67
SF3B3-206ENST00000565990 NEUROG1Q92886 237 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF799Q96GE5 643 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 MARS2Q96GW9 593 aaKnown RBP10.85□□□□□ -0.67
SF3B3-206ENST00000565990 DHRS9Q9BPW9 319 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 TMED9Q9BVK6 235 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 CLEC4MQ9H2X3 399 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-206ENST00000565990 CA10Q9NS85 328 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 FAM206AQ9NX38 181 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 STARD10Q9Y365 291 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 FBN2P35556 2912 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 APCP25054 2843 aa10.85□□□□□ -0.67
SF3B3-206ENST00000565990 DSCAMO60469 2012 aa10.84□□□□□ -0.67
SF3B3-206ENST00000565990 TMEM269A0A1B0GVZ9 245 aa10.84□□□□□ -0.67
SF3B3-206ENST00000565990 PSMD9O00233 223 aa10.84□□□□□ -0.67
SF3B3-206ENST00000565990 HS3ST1O14792 307 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms