RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 GFOD2Q3B7J2 385 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 BRD3OSQ6XYD6 125 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 SPATA24Q86W54 205 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 CPOQ8IVL8 374 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 HS3ST5Q8IZT8 346 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 GALNT4Q8N4A0 578 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 THEM6Q8WUY1 208 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 LRRC29Q8WV35 223 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 PAPOLGQ9BWT3 736 aaKnown RBP16.48■□□□□ 0.23
CLN6-206ENST00000565471 TEX12Q9BXU0 123 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 TLNRD1Q9H1K6 362 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 NIPAL2Q9H841 368 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 SLC25A19Q9HC21 320 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 ABCB9Q9NP78 766 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 BRD7Q9NPI1 651 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 DNAJB9Q9UBS3 223 aa16.48■□□□□ 0.23
CLN6-206ENST00000565471 TCRBV3S1A0A5B6 114 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 ANXA2P2A6NMY6 339 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 DYNC1I1O14576 645 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 FKBP6O75344 327 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 TOX4O94842 621 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 ECDO95905 644 aaPredicted RBP16.47■□□□□ 0.23
CLN6-206ENST00000565471 MMP9P14780 707 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 SLC2A5P22732 501 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 NAA10P41227 235 aaPredicted RBP16.47■□□□□ 0.23
CLN6-206ENST00000565471 PSMA6P60900 246 aaKnown RBP16.47■□□□□ 0.23
CLN6-206ENST00000565471 CBX1P83916 185 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 IL5RAQ01344 420 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 MICBQ29980 383 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 SHISA2Q6UWI4 295 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 WDR82Q6UXN9 313 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 PAPD5Q8NDF8 572 aaKnown RBP16.47■□□□□ 0.23
CLN6-206ENST00000565471 DNAJC9Q8WXX5 260 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 ITPKCQ96DU7 683 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 MICU1Q9BPX6 476 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 PCGF1Q9BSM1 259 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 ZNF391Q9UJN7 358 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 RHBDD3Q9Y3P4 386 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 PCDHGB1Q9Y5G3 927 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 MPC1Q9Y5U8 109 aa16.47■□□□□ 0.23
CLN6-206ENST00000565471 MDFIC2A0A1B0GVS7 189 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 DVL1O14640 695 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 TMPRSS2O15393 492 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 SPRY1O43609 319 aaPredicted RBP16.46■□□□□ 0.23
CLN6-206ENST00000565471 FCN3O75636 299 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 SFTPBP07988 381 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 PRKACGP22612 351 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 CSNK2BP67870 215 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 IL13RA1P78552 427 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 DEFB112Q30KQ8 113 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 METTL11BQ5VVY1 283 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 C12orf43Q96C57 262 aaKnown RBP16.46■□□□□ 0.23
CLN6-206ENST00000565471 NRBF2Q96F24 287 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 WDFY2Q96P53 400 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 TBX15Q96SF7 602 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 RTL8AQ9BWD3 113 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 SIRPDQ9H106 197 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 RASSF4Q9H2L5 321 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 NOX4Q9NPH5 578 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 POMPQ9Y244 141 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 KLHDC2Q9Y2U9 406 aa16.46■□□□□ 0.23
CLN6-206ENST00000565471 IGHV3OR15-7A0A075B7D8 119 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 SRRM5B3KS81 715 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.45■□□□□ 0.22
CLN6-206ENST00000565471 CST4P01036 141 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 ALOX5APP20292 161 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 PDCD1Q15116 288 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 C16orf87Q6PH81 154 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 BTN2A1Q7KYR7 527 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 SLC36A1Q7Z2H8 476 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 BBS1Q8NFJ9 593 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 ZDHHC16Q969W1 377 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 SLC7A6OSQ96CW6 309 aaPredicted RBP16.45■□□□□ 0.22
CLN6-206ENST00000565471 PPP1R3EQ9H7J1 279 aa16.45■□□□□ 0.22
CLN6-206ENST00000565471 CENPVL3A0A0U1RRI6 287 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 TMEM210A6NLX4 147 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 CDIPTO14735 213 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 HOXA3O43365 443 aaPredicted RBP16.44■□□□□ 0.22
CLN6-206ENST00000565471 ACKR3P25106 362 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 RPS7P62081 194 aaKnown RBP16.44■□□□□ 0.22
CLN6-206ENST00000565471 POU4F2Q12837 409 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 PRDX4Q13162 271 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 OR8B12Q8NGG6 310 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 OR10Z1Q8NGY1 313 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 BCAS4Q8TDM0 211 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 ITFG2Q969R8 447 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 LYZL4Q96KX0 146 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 DMRTB1Q96MA1 342 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 YIPF3Q9GZM5 350 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 RPUSD1Q9UJJ7 312 aaKnown RBP16.44■□□□□ 0.22
CLN6-206ENST00000565471 LAMP5Q9UJQ1 280 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 LRP12Q9Y561 859 aa16.44■□□□□ 0.22
CLN6-206ENST00000565471 ACOD1A6NK06 481 aa16.43■□□□□ 0.22
CLN6-206ENST00000565471 POM121CA8CG34 1229 aa16.43■□□□□ 0.22
CLN6-206ENST00000565471 DNAJC8O75937 253 aaPredicted RBP16.43■□□□□ 0.22
CLN6-206ENST00000565471 APOFQ13790 326 aa16.43■□□□□ 0.22
CLN6-206ENST00000565471 FAM76BQ5HYJ3 339 aa16.43■□□□□ 0.22
CLN6-206ENST00000565471 WDR38Q5JTN6 314 aa16.43■□□□□ 0.22
CLN6-206ENST00000565471 TMEM236Q5W0B7 351 aa16.43■□□□□ 0.22
CLN6-206ENST00000565471 RUSC1-AS1Q66K80 236 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms