RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 LILRB4Q8NHJ6 448 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 ZFAND1Q8TCF1 268 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 ISOC2Q96AB3 205 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 FLYWCH2Q96CP2 140 aaKnown RBP1.3□□□□□ -2.2
CHD9-211ENST00000564600 C19orf60Q96EN9 201 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 UBE2E2Q96LR5 201 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 RDH12Q96NR8 316 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 RNF157Q96PX1 679 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 HSD17B10Q99714 261 aaKnown RBP1.3□□□□□ -2.2
CHD9-211ENST00000564600 RNF5Q99942 180 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 RSG1Q9BU20 258 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 SFXN3Q9BWM7 321 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 FBXO44Q9H4M3 255 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 AGPAT4Q9NRZ5 378 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 RGS18Q9NS28 235 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 DUX4Q9UBX2 424 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 CES1P1Q9UKY3 287 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 ACOT9Q9Y305 439 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 SCN4AP35499 1836 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 MYO16Q9Y6X6 1858 aa1.3□□□□□ -2.2
CHD9-211ENST00000564600 IGKV1-27A0A075B6S5 117 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 A0A0A6YYD5 115 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 IGHV2OR16-5A0A0B4J2B6 119 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 CENPXA8MT69 81 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 FAM25EA8MYX2 175 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 H0YC42 278 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 H7C1H1 209 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 UPK1AO00322 258 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 RAD51BO15315 384 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ALOX12BO75342 701 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 SCELO95171 688 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 VAMP5O95183 116 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ETHE1O95571 254 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 TTC4O95801 387 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 PTHP01270 115 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 TRBV12-3P01733 135 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 CATP04040 527 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 GABRG2P18507 467 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 NELFEP18615 380 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 TUBG1P23258 451 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 CD34P28906 385 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 POLR2IP36954 125 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 TAS2R60P59551 318 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 UBE2MP61081 183 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 RPL23P62829 140 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 C2orf54Q08AI8 447 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 STK38Q15208 465 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 OR1Q1Q15612 314 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ZNF829Q3KNS6 432 aaPredicted RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 MPV17L2Q567V2 206 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 HSP90AA4PQ58FG1 418 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 FAM78AQ5JUQ0 283 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 MFSD14CQ5VZR4 134 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 AP1ARQ63HQ0 302 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 DNAJC24Q6P3W2 148 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 GUSBP11Q6P575 273 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 UNQ9165/PRO28630Q6UXU0 137 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 NDUFAF7Q7L592 441 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 MRPL55Q7Z7F7 128 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 FAM58AQ8N1B3 248 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ZNF321PQ8N8H1 164 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ZFP41Q8N8Y5 198 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 OR6K6Q8NGW6 343 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 LINC01560Q8TB33 94 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 OR51E1Q8TCB6 317 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ASZ1Q8WWH4 475 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 SLC25A46Q96AG3 418 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 MRPL48Q96GC5 212 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 KCNS1Q96KK3 526 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ZNF488Q96MN9 340 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ZNF317Q96PQ6 595 aaPredicted RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 TSNAXQ99598 290 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 DOK1Q99704 481 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ANP32EQ9BTT0 268 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 SLIRPQ9GZT3 109 aaKnown RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 GAL3ST2Q9H3Q3 398 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ARMC7Q9H6L4 198 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 WDR55Q9H6Y2 383 aaPredicted RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 MYOZ1Q9NP98 299 aaPredicted RBP1.29□□□□□ -2.2
CHD9-211ENST00000564600 DYRK4Q9NR20 520 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 CHRAC1Q9NRG0 131 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 TUBG2Q9NRH3 451 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 PTTG3PQ9NZH4 202 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 ZNF407Q9C0G0 2248 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 TMEM94Q12767 1356 aa1.29□□□□□ -2.2
CHD9-211ENST00000564600 CCL15-CCL14A0A0B4J2E2 113 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 CIB4A0PJX0 185 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 ANKRD20A5PA0PJZ0 165 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 HACD1B0YJ81 288 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 ZNF593O00488 134 aaPredicted RBP1.28□□□□□ -2.2
CHD9-211ENST00000564600 GABRPO00591 440 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 PLPP1O14494 284 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 RRP8O43159 456 aaKnown RBP1.28□□□□□ -2.2
CHD9-211ENST00000564600 MPDU1O75352 247 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 ZMPSTE24O75844 475 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 TRAPPC6AO75865 159 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 CCNKO75909 580 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 SMC2O95347 1197 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 PAHP00439 452 aa1.28□□□□□ -2.2
CHD9-211ENST00000564600 IGLV2-8P01709 118 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms