RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 LRTOMTQ8WZ04 291 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 TECTBQ96PL2 329 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 JMJD8Q96S16 334 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 NUDT16L1Q9BRJ7 211 aaKnown RBP16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 GABARAPL1Q9H0R8 117 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 COPS3Q9UNS2 423 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 IGHV3OR15-7A0A075B7D8 119 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 TRIM77I1YAP6 450 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 ADAM20O43506 726 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 GYPAP02724 150 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 IGHV4-38-2P0DP08 117 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 ACTG1P63261 375 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 KCNJ8Q15842 424 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 SLX4IPQ5VYV7 408 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 KDM4DQ6B0I6 523 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 FAM90A1Q86YD7 464 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 BCL6BQ8N143 479 aaPredicted RBP16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 SIGLECL1Q8N7X8 197 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 ZDHHC22Q8N966 263 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 LRRC29Q8WV35 223 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 DUS3LQ96G46 650 aaKnown RBP16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 PRRG3Q9BZD7 231 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 NIPAL2Q9H841 368 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 SMURF1Q9HCE7 757 aa16.62■□□□□ 0.25
SHCBP1-203ENST00000564272 TRAV38-1A0A0B4J264 116 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 KIR2DS1A0A191URI9 304 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 ZAR1LA6NP61 321 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 TNFRSF13BO14836 293 aaPredicted RBP16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 LHBP01229 141 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 POU4F2Q12837 409 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 PRDX4Q13162 271 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 C12orf73Q69YU5 71 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 ZDHHC13Q8IUH4 622 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 TCEANCQ8N8B7 351 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 FAM216AQ8WUB2 273 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 ITPKCQ96DU7 683 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 CNN2Q99439 309 aaKnown RBP16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 FAM206AQ9NX38 181 aa16.61■□□□□ 0.25
SHCBP1-203ENST00000564272 TRAV40A0A0B4J280 105 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 ZNF850A8MQ14 1090 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 CIB2O75838 187 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 FCGR1AP12314 374 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 ELF3P78545 371 aaPredicted RBP16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 TUSC1Q2TAM9 212 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 TEX36Q5VZQ5 186 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 KCTD18Q6PI47 426 aaPredicted RBP16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 WDR82Q6UXN9 313 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 FTMTQ8N4E7 242 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 TMEM163Q8TC26 289 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 UPRTQ96BW1 309 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 OR8B4Q96RC9 309 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 CIB1Q99828 191 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 MICU1Q9BPX6 476 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 FGF23Q9GZV9 251 aaPredicted RBP16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 SEMA6AQ9H2E6 1030 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 RASSF4Q9H2L5 321 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 TRIM36Q9NQ86 728 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 ERVK-18Q9QC07 812 aa16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 SOX21Q9Y651 276 aaPredicted RBP16.6■□□□□ 0.25
SHCBP1-203ENST00000564272 ANXA2P2A6NMY6 339 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 HAX1O00165 279 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 ENSAO43768 121 aaKnown RBP16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 FCN3O75636 299 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 PPIAL4GP0DN37 164 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 NPY4RP50391 375 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 FGF12P61328 243 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 UBA52P62987 128 aaKnown RBP16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 IL5RAQ01344 420 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 MFGE8Q08431 387 aaPredicted RBP16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 SNCBQ16143 134 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 AADACL4Q5VUY2 407 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 MEPCEQ7L2J0 689 aaKnown RBP16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 HPSE2Q8WWQ2 592 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 PIGCQ92535 297 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 SEH1LQ96EE3 360 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 ZNF48Q96MX3 618 aaPredicted RBP16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 IL4I1Q96RQ9 567 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 PKP2Q99959 881 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 RTL8AQ9BWD3 113 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 MROQ9BYG7 248 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 TLNRD1Q9H1K6 362 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 RNPEPL1Q9HAU8 725 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 IKZF2Q9UKS7 526 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 MPC1Q9Y5U8 109 aa16.59■□□□□ 0.25
SHCBP1-203ENST00000564272 TMEM269A0A1B0GVZ9 245 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 A0A1B0GW55 424 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 CDIPTO14735 213 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 CST4P01036 141 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX4L2P0CJ85 424 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX4L3P0CJ86 424 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX4L4P0CJ87 422 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX4L5P0CJ88 424 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX4L6P0CJ89 424 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX4L7P0CJ90 424 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 EFNB1P98172 346 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 ROM1Q03395 351 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 NXNL2Q5VZ03 156 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DEGS2Q6QHC5 323 aa16.58■□□□□ 0.24
SHCBP1-203ENST00000564272 DUX4L9Q6RFH8 374 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms