RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 NEU3Q9UQ49 428 aa1.67□□□□□ -2.14
CHD9-209ENST00000564255 ACOT9Q9Y305 439 aa1.67□□□□□ -2.14
CHD9-209ENST00000564255 KLF12Q9Y4X4 402 aa1.67□□□□□ -2.14
CHD9-209ENST00000564255 GMEB1Q9Y692 573 aa1.67□□□□□ -2.14
CHD9-209ENST00000564255 AHDC1Q5TGY3 1603 aaPredicted RBP1.67□□□□□ -2.14
CHD9-209ENST00000564255 KRBOX1C9JBD0 128 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 DFFAO00273 331 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 B4GALT5O43286 388 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 CDC40O60508 579 aaKnown RBP eCLIP1.66□□□□□ -2.14
CHD9-209ENST00000564255 SMC2O95347 1197 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 RHOCP08134 193 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 DTYMKP23919 212 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 POLR2IP36954 125 aaKnown RBP1.66□□□□□ -2.14
CHD9-209ENST00000564255 XRCC4Q13426 336 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 OR1Q1Q15612 314 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 TNXAQ16473 311 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 TMEM205Q6UW68 189 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 CD300LGQ6UXG3 332 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 CDKL3Q8IVW4 592 aaPredicted RBP1.66□□□□□ -2.14
CHD9-209ENST00000564255 UBAC2Q8NBM4 344 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 C19orf18Q8NEA5 215 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 C15orf40Q8WUR7 153 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 GABRG3Q99928 467 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 OR52A5Q9H2C5 316 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 TMEM27Q9HBJ8 222 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 POFUT2Q9Y2G5 429 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 NOTCH3Q9UM47 2321 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 IGHV1OR15-9A0A0B4J2B8 117 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 IGHV1-69DA0A0B4J2H0 117 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 K7EN84 100 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 TNFRSF11BO00300 401 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 GATCO43716 136 aaKnown RBP1.66□□□□□ -2.14
CHD9-209ENST00000564255 YIF1AO95070 293 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 TTC4O95801 387 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 TRBV12-3P01733 135 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 PSG2P11465 335 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 ZNF823P16415 610 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 CXCR1P25024 350 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 RPL23P62829 140 aaKnown RBP1.66□□□□□ -2.14
CHD9-209ENST00000564255 TNNC1P63316 161 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 LOXL1Q08397 574 aaPredicted RBP1.66□□□□□ -2.14
CHD9-209ENST00000564255 C2orf54Q08AI8 447 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 UBE2SQ16763 222 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 FBXW9Q5XUX1 488 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 OR2T5Q6IEZ7 315 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 RTL4Q6ZR62 310 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 NKAIN4Q8IVV8 208 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 KRT222Q8N1A0 295 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 ZNF786Q8N393 782 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 GPR26Q8NDV2 337 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 OR6K2Q8NGY2 324 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 OR6N1Q8NGY5 312 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 OR2T29Q8NH02 315 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 CDKL2Q92772 493 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 ATP6V1G3Q96LB4 118 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 RDH12Q96NR8 316 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 C12orf10Q9HB07 376 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 TREM1Q9NP99 234 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 NYAP2Q9P242 653 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 CLEC2DQ9UHP7 191 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 CFAP43Q8NDM7 1665 aa1.66□□□□□ -2.14
CHD9-209ENST00000564255 RAB19A4D1S5 217 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 SC5DO75845 299 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 PTHP01270 115 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 DNAH10OSP0CZ25 163 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 S100A5P33763 92 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 P2RY2P41231 377 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 ZNF133P52736 654 aaPredicted RBP1.65□□□□□ -2.14
CHD9-209ENST00000564255 TAS2R46P59540 309 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 CRADDP78560 199 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 IFFO1Q0D2I5 559 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 DYNC1I2Q13409 638 aaKnown RBP1.65□□□□□ -2.14
CHD9-209ENST00000564255 MADCAM1Q13477 382 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 GPR176Q14439 515 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 USF2Q15853 346 aaPredicted RBP1.65□□□□□ -2.14
CHD9-209ENST00000564255 TCEAL5Q5H9L2 206 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 TSPO2Q5TGU0 170 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 STEAP4Q687X5 459 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 KDM4DQ6B0I6 523 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 Q6ZVH6 145 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 CA13Q8N1Q1 262 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 TCEAL3Q969E4 200 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 TM4SF18Q96CE8 201 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 LRRC45Q96CN5 670 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 ARL5BQ96KC2 179 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 BMFQ96LC9 184 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 CAMK2N2Q96S95 79 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 ACBD6Q9BR61 282 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 HMG20AQ9NP66 347 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 VAPAQ9P0L0 249 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 OR12D3Q9UGF7 316 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 VAX2Q9UIW0 290 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 CELA1Q9UNI1 258 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 HYOU1Q9Y4L1 999 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 MAGI3Q5TCQ9 1506 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 TET2Q6N021 2002 aaPredicted RBP1.65□□□□□ -2.14
CHD9-209ENST00000564255 PRDM2Q13029 1718 aa1.65□□□□□ -2.14
CHD9-209ENST00000564255 SOGA1O94964 1423 aa1.65□□□□□ -2.15
CHD9-209ENST00000564255 EPRSP07814 1512 aaKnown RBP1.65□□□□□ -2.15
CHD9-209ENST00000564255 TVP23AA6NH52 213 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms